Ruminococcus sp. AM42-11

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM42-11 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility. It has a single replicon, indicating a relatively simple genomic structure, which could have implications for its genetic stability and adaptability. The accession number for Ruminococcus sp. AM42-11 is QUIO00000000.1, providing a reference for researchers interested in studying its genetic and functional characteristics. The presence of flagella suggests that Ruminococcus sp. AM42-11 may have the ability to navigate its environment, which could be important for its ecological role in various habitats. In terms of ecological insight, Ruminococcus species are often associated with the gut microbiota of herbivorous animals, where they play a crucial role in the fermentation of complex carbohydrates. The motility conferred by flagella may enhance their ability to colonize specific niches within the gut, facilitating their contribution to the breakdown of fibrous plant material. This characteristic is vital for the overall health of the host and the efficient processing of dietary components, underscoring the importance of Ruminococcus sp. AM42-11 in microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM42-11
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM42-11
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM42-11 AM42-11.Scaf106, whole genome shotgun

Gene Summary

Adenine Count

1339627 bp

Thymine Count

1363311 bp

Guanine Count

984251 bp

Cytosine Count

1011672 bp

Genome Length

4698861 bp

Protein-coding Genes

3883 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease hiiDW904_05595Not AvailableNegative1208790 - 120954828078.3
ribosome biogenesis gtpase ylqfDW904_05600Not AvailableNegative1209550 - 121040432106.0
signal peptidase iDW904_05605Not AvailableNegative1210506 - 121109921940.6
50s ribosomal protein l19DW904_05610Not AvailableNegative1211397 - 121174413068.0
methionyl aminopeptidaseDW904_05615Not AvailableNegative1211921 - 121279632595.6
cell envelope biogenesis protein ompaDW904_05620Not AvailableNegative1213232 - 121420636178.4
hypothetical proteinDW904_05625Not AvailableNegative1214219 - 121584161037.1
histidine phosphatase family proteinDW904_05630Not AvailableNegative1216193 - 121680423113.7
phenylalanine--trna ligase subunit betaDW904_05635Not AvailableNegative1216804 - 121922189124.4
phenylalanine--trna ligase subunit alphaDW904_05640Not AvailableNegative1219312 - 122033138445.2

Displaying genes 1071 – 1080 of 4014 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.