Ruminococcus sp. AM28-41

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM28-41 is a Gram-positive bacterium characterized by its cocci shape. This species demonstrates the presence of flagella, which may contribute to its motility and ecological interactions. Ruminococcus sp. AM28-41 has a single replicon, indicating a relatively simple genetic organization. The accession number for Ruminococcus sp. AM28-41 is QUJJ00000000.1, which provides a reference point for researchers seeking genetic or genomic information about this strain. As part of the Ruminococcus genus, this bacterium is likely involved in the fermentation processes within the gastrointestinal tracts of herbivores, playing a crucial role in the breakdown of complex polysaccharides from plant materials. The presence of flagella suggests that Ruminococcus sp. AM28-41 may have adapted to navigate its environment, potentially enhancing its ability to colonize specific niches within the gut microbiome. This motility could facilitate interactions with other microorganisms and contribute to the overall dynamics of the microbial community. Understanding the traits of Ruminococcus sp. AM28-41 can provide insights into its ecological role, particularly in the digestion processes of ruminants. The bacterium's capabilities may influence nutrient availability and energy flow within these ecosystems, underscoring the importance of microbial diversity in maintaining the health of herbivorous hosts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM28-41
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM28-41
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM28-41 AM28-41.Scaf89, whole genome shotgun

Gene Summary

Adenine Count

1250351 bp

Thymine Count

1287723 bp

Guanine Count

862102 bp

Cytosine Count

895595 bp

Genome Length

4297211 bp

Protein-coding Genes

3716 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urease subunit betaDW748_02665Not AvailablePositive568728 - 56908713269.8
urease subunit alphaDW748_02670Not AvailablePositive569100 - 57082161190.1
acid-activated urea channelDW748_02675Not AvailablePositive571079 - 57158518470.1
urease accessory protein ureeDW748_02680Not AvailablePositive571635 - 57211118172.8
urease accessory protein urefDW748_02685Not AvailablePositive572130 - 57282226227.5
urease accessory protein uregDW748_02690Not AvailablePositive572975 - 57358322137.7
urease accessory protein uredDW748_02695Not AvailablePositive573590 - 57445632676.1
abc transporter permeaseDW748_02700Not AvailableNegative574536 - 57718197721.1
abc transporter atp-binding proteinDW748_02705Not AvailableNegative577197 - 57786824167.3
sensor histidine kinaseDW748_02710Not AvailableNegative578004 - 57890333109.9

Displaying genes 531 – 540 of 3796 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.