Ruminococcus sp. AF18-22

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF18-22 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism is notable for having a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number QRXE00000000.1, allowing for its identification and further study within microbial databases. The presence of flagella suggests that Ruminococcus sp. AF18-22 may exhibit motility, potentially enabling it to navigate its environment more effectively, which could be advantageous in competitive microbial communities. In terms of ecological significance, Ruminococcus species are often associated with the gastrointestinal tracts of herbivorous animals, where they play a crucial role in the fermentation of complex carbohydrates. They contribute to the breakdown of dietary fibers, facilitating nutrient absorption for their hosts. The ability to move, as indicated by the presence of flagella, may enhance this process by allowing the bacteria to colonize specific niches within the gut environment. Overall, the traits of Ruminococcus sp. AF18-22 underscore its potential importance in microbial ecology, particularly in the context of digestive processes in herbivores. Understanding such bacteria can provide insights into their roles in nutrient cycling and gut health, highlighting their contributions to the overall functioning of ecosystems where they are found.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF18-22
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF18-22
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF18-22 AF18-22.Scaf54, whole genome shotgun

Gene Summary

Adenine Count

892831 bp

Thymine Count

851372 bp

Guanine Count

685650 bp

Cytosine Count

609095 bp

Genome Length

3039156 bp

Protein-coding Genes

2771 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
card-like/trcf domain proteinDWX08_04945Not AvailablePositive1004430 - 100493619683.7
hlyc/corc family transporterDWX08_04950Not AvailablePositive1005093 - 100640649934.5
inosine monophosphate cyclohydrolaseDWX08_04955Not AvailablePositive1006505 - 100721826929.7
phosphoribosylaminoimidazolecarboxamide formyltransferaseDWX08_04960Not AvailablePositive1007235 - 100841343572.9
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeDWX08_04965Not AvailablePositive1008431 - 100886816451.7
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabDWX08_04970Not AvailablePositive1008940 - 101012744055.5
hypothetical proteinDWX08_04975Not AvailablePositive1010247 - 10104809080.74
ribonuclease zDWX08_04980Not AvailablePositive1010482 - 101138733886.1
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadDWX08_04985Not AvailablePositive1011441 - 101246936882.1
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseDWX08_04990Not AvailablePositive1012474 - 101318426907.9

Displaying genes 981 – 990 of 2857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.