Ruminococcus sp. AF18-22

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF18-22 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism is notable for having a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number QRXE00000000.1, allowing for its identification and further study within microbial databases. The presence of flagella suggests that Ruminococcus sp. AF18-22 may exhibit motility, potentially enabling it to navigate its environment more effectively, which could be advantageous in competitive microbial communities. In terms of ecological significance, Ruminococcus species are often associated with the gastrointestinal tracts of herbivorous animals, where they play a crucial role in the fermentation of complex carbohydrates. They contribute to the breakdown of dietary fibers, facilitating nutrient absorption for their hosts. The ability to move, as indicated by the presence of flagella, may enhance this process by allowing the bacteria to colonize specific niches within the gut environment. Overall, the traits of Ruminococcus sp. AF18-22 underscore its potential importance in microbial ecology, particularly in the context of digestive processes in herbivores. Understanding such bacteria can provide insights into their roles in nutrient cycling and gut health, highlighting their contributions to the overall functioning of ecosystems where they are found.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF18-22
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF18-22
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF18-22 AF18-22.Scaf54, whole genome shotgun

Gene Summary

Adenine Count

892831 bp

Thymine Count

851372 bp

Guanine Count

685650 bp

Cytosine Count

609095 bp

Genome Length

3039156 bp

Protein-coding Genes

2771 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts system mannose/fructose/sorbose family transporter subunit iidDWX08_07755Not AvailablePositive1610851 - 161167530338.9
sis domain-containing proteinDWX08_07760Not AvailablePositive1611675 - 161273339290.9
mate family efflux transporterDWX08_07765Not AvailablePositive1612726 - 161410250657.0
rpn family recombination-promoting nuclease/putative transposaseDWX08_07770Not AvailablePositive1614609 - 161551734868.1
rna polymerase sigma factorDWX08_07775Not AvailablePositive1616051 - 161657519949.9
hypothetical proteinDWX08_07780Not AvailablePositive1616596 - 161865676056.6
tatd family deoxyribonucleaseDWX08_07785Not AvailablePositive1618722 - 161948328997.7
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaDWX08_07790Not AvailablePositive1619577 - 162047332875.2
citrate/2-methylcitrate synthaseDWX08_07795Not AvailablePositive1620587 - 162195752116.8
alpha/beta hydrolaseDWX08_07800Not AvailablePositive1621967 - 162291436413.9

Displaying genes 1531 – 1540 of 2857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.