Ruminococcus sp. AF18-22

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF18-22 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism is notable for having a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number QRXE00000000.1, allowing for its identification and further study within microbial databases. The presence of flagella suggests that Ruminococcus sp. AF18-22 may exhibit motility, potentially enabling it to navigate its environment more effectively, which could be advantageous in competitive microbial communities. In terms of ecological significance, Ruminococcus species are often associated with the gastrointestinal tracts of herbivorous animals, where they play a crucial role in the fermentation of complex carbohydrates. They contribute to the breakdown of dietary fibers, facilitating nutrient absorption for their hosts. The ability to move, as indicated by the presence of flagella, may enhance this process by allowing the bacteria to colonize specific niches within the gut environment. Overall, the traits of Ruminococcus sp. AF18-22 underscore its potential importance in microbial ecology, particularly in the context of digestive processes in herbivores. Understanding such bacteria can provide insights into their roles in nutrient cycling and gut health, highlighting their contributions to the overall functioning of ecosystems where they are found.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF18-22
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF18-22
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF18-22 AF18-22.Scaf54, whole genome shotgun

Gene Summary

Adenine Count

892831 bp

Thymine Count

851372 bp

Guanine Count

685650 bp

Cytosine Count

609095 bp

Genome Length

3039156 bp

Protein-coding Genes

2771 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mate family efflux transporterDWX08_05095Not AvailablePositive1034993 - 103631848453.8
m18 family aminopeptidaseDWX08_05100Not AvailablePositive1036396 - 103766447198.3
ferredoxinDWX08_05105Not AvailableNegative1037692 - 103938362056.5
nadh-quinone oxidoreductase subunit nuofDWX08_05110Not AvailableNegative1039396 - 104128268871.5
nad(p)h-dependent oxidoreductase subunit eDWX08_05115Not AvailableNegative1041287 - 104176017333.7
carbohydrate kinaseDWX08_05120Not AvailableNegative1042103 - 104297832666.7
sis domain-containing proteinDWX08_05125Not AvailableNegative1042996 - 104393735709.5
mfs transporterDWX08_05130Not AvailableNegative1043982 - 104528347339.4
amidohydrolaseDWX08_05135Not AvailableNegative1045255 - 104681159007.8
gntr family transcriptional regulatorDWX08_05140Not AvailablePositive1047057 - 104778228045.7

Displaying genes 1011 – 1020 of 2857 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.