Ruminococcus sp. AF13-37

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF13-37 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility and ability to interact with its environment. Ruminococcus sp. AF13-37 has a single replicon, indicating a relatively straightforward genomic organization. The genomic data for this strain is cataloged under the accession QRZX00000000.1. As a member of the Ruminococcus genus, this bacterium is likely to play a role in the degradation of complex carbohydrates, particularly in ruminant digestive systems. Its ability to metabolize polysaccharides contributes to the overall fermentation processes occurring in the rumen, which are critical for the energy acquisition of herbivorous mammals. The presence of flagella suggests that Ruminococcus sp. AF13-37 may have enhanced capabilities for colonization or movement within the gut, potentially influencing its ecological niche and interactions with other microbial communities. In summary, Ruminococcus sp. AF13-37 exhibits key traits, including its Gram-positive nature, cocci morphology, and the presence of flagella, which support its role in the fermentation processes within ruminant digestive systems. This bacterium's ecological significance lies in its potential contribution to the breakdown of dietary fibers, thus facilitating nutrient absorption in herbivores.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF13-37
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF13-37
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF13-37 AF13-37.Scaf110, whole genome shotgun

Gene Summary

Adenine Count

1360807 bp

Thymine Count

1300810 bp

Guanine Count

966443 bp

Cytosine Count

873136 bp

Genome Length

4501857 bp

Protein-coding Genes

3913 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulatorDWV90_03955Not AvailableNegative834954 - 83651059719.9
sensor histidine kinaseDWV90_03960Not AvailableNegative836503 - 83829068209.2
carbohydrate abc transporter permeaseDWV90_03965Not AvailableNegative838477 - 83932531564.7
sugar abc transporter permeaseDWV90_03970Not AvailableNegative839329 - 84023133236.8
extracellular solute-binding proteinDWV90_03975Not AvailableNegative840645 - 84197048305.2
iron-containing alcohol dehydrogenaseDWV90_03980Not AvailablePositive842610 - 84379443578.0
Trna-pheNot AvailableNot AvailablePositive844030 - 844102Not Available
o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthaseDWV90_03990Not AvailablePositive844423 - 84570646588.1
hypothetical proteinDWV90_03995Not AvailableNegative845963 - 84706039236.1
Trna-glyNot AvailableNot AvailablePositive847304 - 847376Not Available

Displaying genes 771 – 780 of 4003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.