Ruminococcus sp. AF13-37

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF13-37 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility and ability to interact with its environment. Ruminococcus sp. AF13-37 has a single replicon, indicating a relatively straightforward genomic organization. The genomic data for this strain is cataloged under the accession QRZX00000000.1. As a member of the Ruminococcus genus, this bacterium is likely to play a role in the degradation of complex carbohydrates, particularly in ruminant digestive systems. Its ability to metabolize polysaccharides contributes to the overall fermentation processes occurring in the rumen, which are critical for the energy acquisition of herbivorous mammals. The presence of flagella suggests that Ruminococcus sp. AF13-37 may have enhanced capabilities for colonization or movement within the gut, potentially influencing its ecological niche and interactions with other microbial communities. In summary, Ruminococcus sp. AF13-37 exhibits key traits, including its Gram-positive nature, cocci morphology, and the presence of flagella, which support its role in the fermentation processes within ruminant digestive systems. This bacterium's ecological significance lies in its potential contribution to the breakdown of dietary fibers, thus facilitating nutrient absorption in herbivores.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF13-37
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF13-37
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF13-37 AF13-37.Scaf110, whole genome shotgun

Gene Summary

Adenine Count

1360807 bp

Thymine Count

1300810 bp

Guanine Count

966443 bp

Cytosine Count

873136 bp

Genome Length

4501857 bp

Protein-coding Genes

3913 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
microcompartment protein pdubDWV90_15760Not AvailablePositive3365884 - 336660024728.5
duf2798 domain-containing proteinDWV90_15765Not AvailablePositive3366843 - 336733118318.1
type ii toxin-antitoxin system phd/yefm family antitoxinDWV90_15770Not AvailablePositive3367546 - 336780610010.2
4fe-4s dicluster domain-containing proteinDWV90_15780Not AvailablePositive3368888 - 336974831452.6
sulfurtransferase tusa family proteinDWV90_15785Not AvailablePositive3369741 - 33699869068.7
thiol reductase thioredoxinDWV90_15790Not AvailablePositive3370078 - 337039511955.5
sulfur carrier protein thisDWV90_15795Not AvailablePositive3370440 - 33706467565.89
molybdopterin-synthase adenylyltransferase moebDWV90_15800Not AvailablePositive3370646 - 337145229015.4
sulfate abc transporter substrate-binding proteinDWV90_15810Not AvailablePositive3371994 - 337299237351.4
sulfate abc transporter permease subunit cystDWV90_15815Not AvailablePositive3373155 - 337399130250.9

Displaying genes 3001 – 3010 of 4003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.