Ruminococcus sp. AF13-37

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF13-37 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility and ability to interact with its environment. Ruminococcus sp. AF13-37 has a single replicon, indicating a relatively straightforward genomic organization. The genomic data for this strain is cataloged under the accession QRZX00000000.1. As a member of the Ruminococcus genus, this bacterium is likely to play a role in the degradation of complex carbohydrates, particularly in ruminant digestive systems. Its ability to metabolize polysaccharides contributes to the overall fermentation processes occurring in the rumen, which are critical for the energy acquisition of herbivorous mammals. The presence of flagella suggests that Ruminococcus sp. AF13-37 may have enhanced capabilities for colonization or movement within the gut, potentially influencing its ecological niche and interactions with other microbial communities. In summary, Ruminococcus sp. AF13-37 exhibits key traits, including its Gram-positive nature, cocci morphology, and the presence of flagella, which support its role in the fermentation processes within ruminant digestive systems. This bacterium's ecological significance lies in its potential contribution to the breakdown of dietary fibers, thus facilitating nutrient absorption in herbivores.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF13-37
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF13-37
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF13-37 AF13-37.Scaf110, whole genome shotgun

Gene Summary

Adenine Count

1360807 bp

Thymine Count

1300810 bp

Guanine Count

966443 bp

Cytosine Count

873136 bp

Genome Length

4501857 bp

Protein-coding Genes

3913 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr03905 family tscpd domain-containing proteinDWV90_11585Not AvailablePositive2496252 - 24964978775.53
mbl fold metallo-hydrolaseDWV90_11590Not AvailableNegative2496669 - 249828560015.5
hypothetical proteinDWV90_11595Not AvailableNegative2498591 - 249914520989.5
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseDWV90_11600Not AvailablePositive2499316 - 250038339084.6
sigma-70 family rna polymerase sigma factorDWV90_11605Not AvailableNegative2500446 - 250099121270.0
hit family proteinDWV90_11610Not AvailableNegative2501018 - 250143115165.3
sensor histidine kinaseDWV90_11615Not AvailablePositive2501616 - 250230825865.2
rhomboid family intramembrane serine proteaseDWV90_11620Not AvailableNegative2502284 - 250289221969.3
fha domain-containing proteinDWV90_11625Not AvailableNegative2503001 - 250437751965.4
pilus assembly proteinDWV90_11630Not AvailableNegative2504379 - 250488518537.3

Displaying genes 2221 – 2230 of 4003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.