Ruminococcus sp. AF13-37

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF13-37 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which may contribute to its motility and ability to interact with its environment. Ruminococcus sp. AF13-37 has a single replicon, indicating a relatively straightforward genomic organization. The genomic data for this strain is cataloged under the accession QRZX00000000.1. As a member of the Ruminococcus genus, this bacterium is likely to play a role in the degradation of complex carbohydrates, particularly in ruminant digestive systems. Its ability to metabolize polysaccharides contributes to the overall fermentation processes occurring in the rumen, which are critical for the energy acquisition of herbivorous mammals. The presence of flagella suggests that Ruminococcus sp. AF13-37 may have enhanced capabilities for colonization or movement within the gut, potentially influencing its ecological niche and interactions with other microbial communities. In summary, Ruminococcus sp. AF13-37 exhibits key traits, including its Gram-positive nature, cocci morphology, and the presence of flagella, which support its role in the fermentation processes within ruminant digestive systems. This bacterium's ecological significance lies in its potential contribution to the breakdown of dietary fibers, thus facilitating nutrient absorption in herbivores.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF13-37
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF13-37
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF13-37 AF13-37.Scaf110, whole genome shotgun

Gene Summary

Adenine Count

1360807 bp

Thymine Count

1300810 bp

Guanine Count

966443 bp

Cytosine Count

873136 bp

Genome Length

4501857 bp

Protein-coding Genes

3913 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-formyltetrahydrofolate cyclo-ligaseDWV90_07445Not AvailablePositive1579431 - 157998821273.6
glutamate-5-semialdehyde dehydrogenaseDWV90_07450Not AvailablePositive1580003 - 158125345587.8
hypothetical proteinDWV90_07455Not AvailablePositive1581394 - 158347271075.7
zinc carboxypeptidaseDWV90_07460Not AvailablePositive1583644 - 158454034616.4
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabDWV90_07465Not AvailablePositive1584623 - 158602353516.5
mate family efflux transporterDWV90_07470Not AvailablePositive1586220 - 158753947903.2
csor family transcriptional regulatorDWV90_07475Not AvailablePositive1587885 - 158819911857.3
heavy metal translocating p-type atpaseDWV90_07480Not AvailablePositive1588274 - 159092593997.0
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhDWV90_07485Not AvailablePositive1590944 - 159199939968.0
diguanylate cyclaseDWV90_07490Not AvailablePositive1592447 - 159442376665.9

Displaying genes 1431 – 1440 of 4003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.