Ruminococcus sp. AF45-4BH

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF45-4BH is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, indicating a potential for motility, which could play a role in its ecological niche. Genetically, Ruminococcus sp. AF45-4BH is noted for having a single replicon, suggesting streamlined genomic organization. The accession number for this strain is QUDK00000000.1, which serves as a reference for further genetic and taxonomic studies. Ruminococcus species are generally known to be involved in the fermentation of complex carbohydrates, contributing significantly to the digestive processes in the gut microbiota of various animals, particularly herbivores. The presence of flagella may enhance its ability to colonize specific environments within the gut, allowing it to interact with other microbial communities and host tissues. This motility could facilitate its role in the breakdown of dietary fibers, promoting nutrient utilization and energy extraction in symbiotic relationships with host organisms. Additionally, Ruminococcus sp. AF45-4BH may be significant in maintaining gut health and influencing overall microbial diversity, which is crucial for the stability of the gut ecosystem. Understanding the specific traits of Ruminococcus sp. AF45-4BH can provide insights into its ecological role and contributions to gut microbiota functionality, highlighting the importance of such microorganisms in digestive health and nutrient cycling.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF45-4BH
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF45-4BH
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF45-4BH AF45-4BH.Scaf105, whole genome shotgun

Gene Summary

Adenine Count

988718 bp

Thymine Count

1029684 bp

Guanine Count

719222 bp

Cytosine Count

769283 bp

Genome Length

3507568 bp

Protein-coding Genes

2904 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase large subunitDW073_07320Not AvailableNegative1540078 - 154132844803.9
3-isopropylmalate dehydratase small subunitDW073_07325Not AvailableNegative1541331 - 154181317281.7
mate family efflux transporterDW073_07330Not AvailableNegative1541892 - 154324149039.7
n-acetyltransferaseDW073_07335Not AvailableNegative1543351 - 154383918383.8
gamma carbonic anhydrase family proteinDW073_07340Not AvailableNegative1543899 - 154440217804.5
permeaseDW073_07345Not AvailableNegative1544682 - 154561133556.6
elongation factor tsDW073_07350Not AvailableNegative1545813 - 154675434054.7
30s ribosomal protein s2DW073_07355Not AvailableNegative1546785 - 154751326996.6
rrna pseudouridine synthaseDW073_07360Not AvailableNegative1547977 - 154875028428.7
mfs transporterDW073_07365Not AvailableNegative1548760 - 155100984462.6

Displaying genes 1291 – 1300 of 2964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.