Parabacteroides sp. AM08-6

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AM08-6 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species possesses flagella, which may contribute to its motility and ability to navigate its environment. Parabacteroides sp. AM08-6 is notable for having a single replicon, indicating a streamlined genomic organization that may reflect its adaptability and efficiency in various ecological niches. In terms of genetic data, the accession number for this strain is QRMP00000000.1, which provides a reference for researchers interested in studying its genomic features and potential applications. The existence of a single replicon could suggest a relatively simple genetic architecture that may be advantageous for rapid growth and reproduction in specific environments. Biologically, the traits of Parabacteroides sp. AM08-6 may facilitate its role in microbial communities, particularly in gut microbiota, where bacteria can influence digestion and host health. The presence of flagella could enhance its ability to colonize host tissues or compete for resources within the microbiome. As a member of the Parabacteroides genus, this strain may participate in anaerobic fermentation processes, contributing to the breakdown of complex carbohydrates and production of short-chain fatty acids, which are important for host metabolism and health. Overall, the specific traits of Parabacteroides sp. AM08-6, including its Gram-negative status, rod shape, flagella presence, and genetic organization, highlight its potential ecological role and biological significance in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AM08-6
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Parabacteroides sp. AM08-6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AM08-6 AM08-6.Scaf94, whole genome shotgun

Gene Summary

Adenine Count

1230486 bp

Thymine Count

1218181 bp

Guanine Count

864998 bp

Cytosine Count

875621 bp

Genome Length

4189784 bp

Protein-coding Genes

3410 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseDW103_14860Not AvailableNegative3538275 - 353897025408.7
exodeoxyribonuclease vii small subunitDW103_14865Not AvailableNegative3538970 - 35391677508.12
exodeoxyribonuclease vii large subunitDW103_14870Not AvailableNegative3539181 - 354056651997.7
peptidase s8DW103_14875Not AvailableNegative3540547 - 354192350183.7
asnc family transcriptional regulatorDW103_14880Not AvailableNegative3542036 - 354250317777.9
fkbp-type peptidyl-prolyl cis-trans isomeraseDW103_14885Not AvailableNegative3542676 - 354340125629.6
fkbp-type peptidyl-prolyl cis-trans isomeraseDW103_14890Not AvailableNegative3543416 - 354400321358.5
hydrolaseDW103_14900Not AvailablePositive3546923 - 354810745625.9
glycoside hydrolase family 125 proteinDW103_14905Not AvailablePositive3548116 - 354958255392.9
hypothetical proteinDW103_14915Not AvailablePositive3550072 - 355206376354.2

Displaying genes 2921 – 2930 of 3505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.