Parabacteroides sp. AF48-14

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF48-14 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait may play a role in its ecological interactions and adaptations within its environment. The organism has a single replicon, indicating a streamlined genome structure that may facilitate efficient replication and regulation of its genetic material. The taxonomic classification of Parabacteroides sp. AF48-14, as indicated by its accession number QUDI00000000.1, places it within a genus known for its associations with the human gut microbiota. Members of the Parabacteroides genus are often studied for their roles in gut health, potential metabolic functions, and interactions with host immunity. The presence of flagella in Parabacteroides sp. AF48-14 might enhance its ability to colonize specific niches within the gut environment, allowing it to compete effectively with other microbial species. This capability could contribute to its survival and functionality in diverse ecological contexts. Understanding the traits of Parabacteroides sp. AF48-14 may provide insights into its ecological role and the broader implications for gut microbiome dynamics, potentially influencing host health and disease states.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF48-14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF48-14 AF48-14.Scaf111, whole genome shotgun

Gene Summary

Adenine Count

1418236 bp

Thymine Count

1411878 bp

Guanine Count

1198666 bp

Cytosine Count

1219360 bp

Genome Length

5248140 bp

Protein-coding Genes

3773 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated helicase cas3'DW083_16930Not AvailableNegative4142063 - 414428883414.6
dna-binding response regulatorDW083_16945Not AvailablePositive4148300 - 414899226456.2
mfs transporterDW083_16950Not AvailableNegative4148997 - 415021444356.9
thiol peroxidaseDW083_16955Not AvailableNegative4150348 - 415085117779.6
dna recombination protein rmucDW083_16960Not AvailablePositive4151012 - 415228648479.2
yfcc family proteinDW083_16965Not AvailablePositive4152283 - 415386658054.9
dna polymerase ivDW083_16970Not AvailablePositive4153866 - 415495141126.4
l-rhamnose mutarotaseDW083_16975Not AvailableNegative4154974 - 415536315333.3
type ii toxin-antitoxin system hica family toxinDW083_16980Not AvailablePositive4155626 - 41558086709.15
pilus assembly protein hicbDW083_16985Not AvailablePositive4155902 - 415629714490.2

Displaying genes 3021 – 3030 of 3863 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.