Parabacteroides sp. AF48-14

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF48-14 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait may play a role in its ecological interactions and adaptations within its environment. The organism has a single replicon, indicating a streamlined genome structure that may facilitate efficient replication and regulation of its genetic material. The taxonomic classification of Parabacteroides sp. AF48-14, as indicated by its accession number QUDI00000000.1, places it within a genus known for its associations with the human gut microbiota. Members of the Parabacteroides genus are often studied for their roles in gut health, potential metabolic functions, and interactions with host immunity. The presence of flagella in Parabacteroides sp. AF48-14 might enhance its ability to colonize specific niches within the gut environment, allowing it to compete effectively with other microbial species. This capability could contribute to its survival and functionality in diverse ecological contexts. Understanding the traits of Parabacteroides sp. AF48-14 may provide insights into its ecological role and the broader implications for gut microbiome dynamics, potentially influencing host health and disease states.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF48-14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF48-14 AF48-14.Scaf111, whole genome shotgun

Gene Summary

Adenine Count

1418236 bp

Thymine Count

1411878 bp

Guanine Count

1198666 bp

Cytosine Count

1219360 bp

Genome Length

5248140 bp

Protein-coding Genes

3773 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
smi1/knr4 family proteinDW083_11105Not AvailableNegative2715151 - 271556415666.4
smi1/knr4 family proteinDW083_11115Not AvailableNegative2716398 - 271702423963.2
hypothetical proteinDW083_11125Not AvailableNegative2718248 - 271894327201.2
transposaseDW083_11130Not AvailableNegative2719232 - 272045248238.1
hypothetical proteinDW083_11145Not AvailablePositive2723459 - 27236748326.8
type ia dna topoisomeraseDW083_11150Not AvailablePositive2723690 - 272578977780.2
duf1896 domain-containing proteinDW083_11155Not AvailablePositive2725873 - 272638219288.7
duf1016 domain-containing proteinDW083_11165Not AvailableNegative2732554 - 273356739531.5
dna-binding proteinDW083_11170Not AvailableNegative2733703 - 273402913049.7
dna-binding proteinDW083_11175Not AvailableNegative2734033 - 273434412198.8

Displaying genes 1991 – 2000 of 3863 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.