Parabacteroides sp. AF48-14

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF48-14 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait may play a role in its ecological interactions and adaptations within its environment. The organism has a single replicon, indicating a streamlined genome structure that may facilitate efficient replication and regulation of its genetic material. The taxonomic classification of Parabacteroides sp. AF48-14, as indicated by its accession number QUDI00000000.1, places it within a genus known for its associations with the human gut microbiota. Members of the Parabacteroides genus are often studied for their roles in gut health, potential metabolic functions, and interactions with host immunity. The presence of flagella in Parabacteroides sp. AF48-14 might enhance its ability to colonize specific niches within the gut environment, allowing it to compete effectively with other microbial species. This capability could contribute to its survival and functionality in diverse ecological contexts. Understanding the traits of Parabacteroides sp. AF48-14 may provide insights into its ecological role and the broader implications for gut microbiome dynamics, potentially influencing host health and disease states.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF48-14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF48-14 AF48-14.Scaf111, whole genome shotgun

Gene Summary

Adenine Count

1418236 bp

Thymine Count

1411878 bp

Guanine Count

1198666 bp

Cytosine Count

1219360 bp

Genome Length

5248140 bp

Protein-coding Genes

3773 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinDW083_08535Not AvailableNegative2079097 - 208088467484.0
tonb-dependent receptorDW083_08540Not AvailableNegative2080903 - 2084220122561.0
duf4974 domain-containing proteinDW083_08545Not AvailableNegative2084418 - 208543139077.2
rna polymerase sigma-70 factorDW083_08550Not AvailableNegative2085488 - 208606322723.1
insulinase family proteinDW083_08555Not AvailableNegative2086226 - 2089138110416.0
methionine adenosyltransferaseDW083_08560Not AvailableNegative2089273 - 209055947402.1
hypothetical proteinDW083_08565Not AvailableNegative2090821 - 20910127279.99
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDW083_08570Not AvailableNegative2091009 - 209146717149.8
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaDW083_08575Not AvailableNegative2091478 - 209252739951.0
trna pseudouridine(55) synthase trubDW083_08580Not AvailableNegative2092555 - 209326226558.4

Displaying genes 1541 – 1550 of 3863 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.