Parabacteroides sp. AF48-14

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Tannerellaceae

Genus

Parabacteroides

Description

Parabacteroides sp. AF48-14 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait may play a role in its ecological interactions and adaptations within its environment. The organism has a single replicon, indicating a streamlined genome structure that may facilitate efficient replication and regulation of its genetic material. The taxonomic classification of Parabacteroides sp. AF48-14, as indicated by its accession number QUDI00000000.1, places it within a genus known for its associations with the human gut microbiota. Members of the Parabacteroides genus are often studied for their roles in gut health, potential metabolic functions, and interactions with host immunity. The presence of flagella in Parabacteroides sp. AF48-14 might enhance its ability to colonize specific niches within the gut environment, allowing it to compete effectively with other microbial species. This capability could contribute to its survival and functionality in diverse ecological contexts. Understanding the traits of Parabacteroides sp. AF48-14 may provide insights into its ecological role and the broader implications for gut microbiome dynamics, potentially influencing host health and disease states.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyTannerellaceae
GenusParabacteroides
SpeciesParabacteroides sp. AF48-14
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parabacteroides sp. AF48-14 AF48-14.Scaf111, whole genome shotgun

Gene Summary

Adenine Count

1418236 bp

Thymine Count

1411878 bp

Guanine Count

1198666 bp

Cytosine Count

1219360 bp

Genome Length

5248140 bp

Protein-coding Genes

3773 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW083_06885Not AvailablePositive1673352 - 167447343495.2
metallophosphoesteraseDW083_06890Not AvailableNegative1674470 - 167496418605.3
xre family transcriptional regulatorDW083_06895Not AvailableNegative1675016 - 167531211167.6
type ii toxin-antitoxin system rele/pare family toxinDW083_06900Not AvailableNegative1675287 - 167563113824.7
rna degradosome polyphosphate kinaseDW083_06905Not AvailablePositive1675791 - 167786081009.9
hypothetical proteinDW083_06910Not AvailablePositive1677866 - 167851025499.8
duf4837 family proteinDW083_06915Not AvailablePositive1678704 - 167970537790.4
abc transporter permeaseDW083_06920Not AvailablePositive1679752 - 168211888628.0
recombinase recaDW083_06925Not AvailableNegative1682839 - 168388237364.9
thioredoxin-dependent thiol peroxidaseDW083_06930Not AvailableNegative1683890 - 168434816808.1

Displaying genes 1251 – 1260 of 3863 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.