Lysobacter sp. TY2-98 str. Junwon Lee

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter sp. TY2-98, also known as strain Junwon Lee, is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism is notable for its single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genetic information for Lysobacter sp. TY2-98 is accessible under the accession number NZ_CP031413.1. The genus Lysobacter is known for its diverse ecological roles, often found in soil and aquatic environments, where it plays a part in the degradation of complex organic materials. This bacterium's Gram-negative cell wall structure may provide advantages in its habitat, such as enhanced resistance to certain environmental stresses or antibiotics. Overall, Lysobacter sp. TY2-98 exemplifies the diverse adaptations of bacteria within the Lysobacter genus. Its unique traits may contribute to its ecological function, particularly in nutrient cycling and the breakdown of organic matter, emphasizing its potential importance in microbial ecology and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter sp. TY2-98
StrainJunwon Lee

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter sp. TY2-98 str. Junwon Lee
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter sp. TY2-98 chromosome, complete genome.

Gene Summary

Adenine Count

511970 bp

Thymine Count

511367 bp

Guanine Count

1066386 bp

Cytosine Count

1066896 bp

Genome Length

3156619 bp

Protein-coding Genes

2974 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lamin tail domain-containing proteinDWG18_RS00110Not AvailableNegative18938 - 22483121887.0
tryptophan 2,3-dioxygenaseDWG18_RS00115Not AvailablePositive22656 - 2352533065.8
peptide mfs transporterDWG18_RS00120Not AvailablePositive23707 - 2521854464.3
marr family winged helix-turn-helix transcriptional regulatorDWG18_RS00125Not AvailableNegative25287 - 2576317509.9
4-hydroxyphenylpyruvate dioxygenaseDWG18_RS00130Not AvailablePositive25859 - 2693240055.5
homogentisate 1,2-dioxygenaseDWG18_RS00135Not AvailablePositive26994 - 2830747873.4
lectinDWG18_RS00140Not AvailablePositive28370 - 2910424876.8
sodium:calcium antiporterDWG18_RS00145Not AvailablePositive29114 - 3007933092.9
na+/h+ antiporter nhaaDWG18_RS00150Not AvailablePositive30111 - 3133442092.9
nad-dependent epimerase/dehydratase family proteinDWG18_RS00155Not AvailablePositive31334 - 3219731330.8

Displaying genes 21 – 30 of 3032 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.