Agarivorans sp. Toyoura001

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Agarivorans

Description

Agarivorans sp. Toyoura001 is a Gram-negative, rod-shaped bacterium. This organism is notable for having a single replicon, which suggests a streamlined genomic structure that may influence its reproductive and metabolic capabilities. The accession number for Agarivorans sp. Toyoura001 is BJEQ00000000.1, indicating the availability of its genomic data for further study. The classification of Agarivorans sp. in the context of its ecological role is particularly interesting. As members of the Agarivorans genus, these bacteria are known for their ability to degrade agar, a polysaccharide derived from red algae. This characteristic not only highlights their potential role in nutrient cycling within marine environments but also suggests their importance in the degradation of algal biomass. In conclusion, Agarivorans sp. Toyoura001, with its Gram-negative, rod-shaped morphology and single replicon, may play a significant role in the decomposition processes in its habitat, contributing to the overall health and balance of marine ecosystems. Further studies on its metabolic pathways could provide valuable insights into its ecological functions and interactions within marine microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAgarivorans
SpeciesAgarivorans sp. Toyoura001
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agarivorans sp. Toyoura001 DNA, sequence60, whole genome shotgun

Gene Summary

Adenine Count

1309845 bp

Thymine Count

1292608 bp

Guanine Count

1019485 bp

Cytosine Count

1044271 bp

Genome Length

4666209 bp

Protein-coding Genes

4257 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carotenoid dehydrogenaseAHAT_40110Not AvailableNegative4374964 - 437557222577.3
transcription elongation factor greaAHAT_40120Not AvailableNegative4375631 - 437616719825.7
carbamoyl-phosphate synthase (glutamine-hydrolyzing)AHAT_40130Not AvailableNegative4376255 - 4379473117404.0
carbamoyl-phosphate synthase small chainAHAT_40140Not AvailableNegative4379493 - 438063541154.9
pullulanaseAHAT_40150Not AvailableNegative4380942 - 4385723171717.0
4-hydroxy-tetrahydrodipicolinate reductaseAHAT_40160Not AvailableNegative4386075 - 438688728744.5
nitrate abc transporter atp-binding proteinAHAT_40170Not AvailableNegative4387112 - 438795130966.4
nitrate transporterAHAT_40180Not AvailableNegative4387967 - 438898937428.4
nitrate abc transporter substrate-binding proteinAHAT_40190Not AvailableNegative4389058 - 439044351545.2
peptidyl-prolyl cis-trans isomeraseAHAT_40200Not AvailableNegative4391570 - 439219022143.1

Displaying genes 4071 – 4080 of 4326 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.