Corallincola holothuriorum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Psychromonadaceae

Genus

Corallincola

Description

Corallincola holothuriorum is characterized by having a single replicon. The genetic information for this species is cataloged under the accession number QPID00000000.1. This unique genetic configuration suggests a streamlined genomic architecture, which may be advantageous for its adaptation to specific environmental conditions. As a member of its ecological niche, Corallincola holothuriorum likely plays a role in its habitat dynamics, although specific ecological functions are not detailed in the provided data. The presence of a single replicon may indicate a simplified metabolic pathway, potentially allowing for efficient resource utilization in its environment. Understanding the genomic structure of Corallincola holothuriorum could provide insights into its evolutionary adaptations and ecological interactions. The relationship between its genetic traits and ecological roles remains a topic for further research, as the implications of its single replicon on adaptability and survival in diverse marine ecosystems are not fully explored in the available evidence.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPsychromonadaceae
GenusCorallincola
SpeciesCorallincola holothuriorum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallincola holothuriorum strain C4 Scaffold30, whole genome

Gene Summary

Adenine Count

1068640 bp

Thymine Count

1129277 bp

Guanine Count

1099698 bp

Cytosine Count

1010632 bp

Genome Length

4308247 bp

Protein-coding Genes

3748 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidylprolyl isomeraseDU002_02685Not AvailableNegative630288 - 63076716933.7
penicillin acylase family proteinDU002_02690Not AvailableNegative630915 - 63330888979.0
high-potential iron sulfur protein 2DU002_02695Not AvailableNegative633521 - 63382611141.3
hypothetical proteinDU002_02700Not AvailableNegative633984 - 6341696977.13
bifunctional 2-methylcitrate dehydratase/aconitate hydrataseDU002_02705Not AvailableNegative634360 - 63580853796.3
2-methylcitrate synthaseDU002_02710Not AvailableNegative635859 - 63699542028.4
methylisocitrate lyaseDU002_02715Not AvailableNegative637112 - 63799031672.5
gntr family transcriptional regulatorDU002_02720Not AvailableNegative637987 - 63873328060.4
hypothetical proteinDU002_02725Not AvailableNegative638804 - 63917214332.9
smi1/knr4 family proteinDU002_02730Not AvailableNegative639577 - 63997815194.8

Displaying genes 541 – 550 of 3819 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.