Corallincola holothuriorum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Psychromonadaceae

Genus

Corallincola

Description

Corallincola holothuriorum is characterized by having a single replicon. The genetic information for this species is cataloged under the accession number QPID00000000.1. This unique genetic configuration suggests a streamlined genomic architecture, which may be advantageous for its adaptation to specific environmental conditions. As a member of its ecological niche, Corallincola holothuriorum likely plays a role in its habitat dynamics, although specific ecological functions are not detailed in the provided data. The presence of a single replicon may indicate a simplified metabolic pathway, potentially allowing for efficient resource utilization in its environment. Understanding the genomic structure of Corallincola holothuriorum could provide insights into its evolutionary adaptations and ecological interactions. The relationship between its genetic traits and ecological roles remains a topic for further research, as the implications of its single replicon on adaptability and survival in diverse marine ecosystems are not fully explored in the available evidence.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPsychromonadaceae
GenusCorallincola
SpeciesCorallincola holothuriorum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallincola holothuriorum strain C4 Scaffold30, whole genome

Gene Summary

Adenine Count

1068640 bp

Thymine Count

1129277 bp

Guanine Count

1099698 bp

Cytosine Count

1010632 bp

Genome Length

4308247 bp

Protein-coding Genes

3748 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pseudouridine synthaseDU002_00140Not AvailableNegative26545 - 2715923018.8
nadp-dependent isocitrate dehydrogenaseDU002_00145Not AvailablePositive27250 - 2850345171.5
cold shock domain-containing protein cspdDU002_00150Not AvailableNegative28660 - 288757837.23
atp-dependent clp protease adapter clpsDU002_00155Not AvailablePositive29111 - 2943111902.3
atp-dependent clp protease atp-binding subunit clpaDU002_00160Not AvailablePositive29479 - 3175284196.9
translation initiation factor if-1DU002_00165Not AvailableNegative31818 - 320368219.09
arginyltransferaseDU002_00170Not AvailableNegative32119 - 3282927745.8
leucyl/phenylalanyl-trna--protein transferaseDU002_00175Not AvailableNegative32813 - 3354727507.7
thioredoxin-disulfide reductaseDU002_00180Not AvailableNegative33649 - 3459934036.4
alanine dehydrogenaseDU002_00185Not AvailableNegative34716 - 3582838844.1

Displaying genes 31 – 40 of 3819 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.