Corallincola holothuriorum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Psychromonadaceae

Genus

Corallincola

Description

Corallincola holothuriorum is characterized by having a single replicon. The genetic information for this species is cataloged under the accession number QPID00000000.1. This unique genetic configuration suggests a streamlined genomic architecture, which may be advantageous for its adaptation to specific environmental conditions. As a member of its ecological niche, Corallincola holothuriorum likely plays a role in its habitat dynamics, although specific ecological functions are not detailed in the provided data. The presence of a single replicon may indicate a simplified metabolic pathway, potentially allowing for efficient resource utilization in its environment. Understanding the genomic structure of Corallincola holothuriorum could provide insights into its evolutionary adaptations and ecological interactions. The relationship between its genetic traits and ecological roles remains a topic for further research, as the implications of its single replicon on adaptability and survival in diverse marine ecosystems are not fully explored in the available evidence.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPsychromonadaceae
GenusCorallincola
SpeciesCorallincola holothuriorum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallincola holothuriorum strain C4 Scaffold30, whole genome

Gene Summary

Adenine Count

1068640 bp

Thymine Count

1129277 bp

Guanine Count

1099698 bp

Cytosine Count

1010632 bp

Genome Length

4308247 bp

Protein-coding Genes

3748 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system baseplate subunit tssgDU002_01835Not AvailableNegative442061 - 44308338501.4
type vi secretion system baseplate subunit tssfDU002_01840Not AvailableNegative443047 - 44487068870.2
type vi secretion system baseplate subunit tsseDU002_01845Not AvailableNegative444867 - 44535818765.4
protein of avirulence locus impeDU002_01850Not AvailableNegative445365 - 44618029954.6
type vi secretion system contractile sheath large subunitDU002_01855Not AvailableNegative446188 - 44760052825.0
type vi secretion system contractile sheath large subunitDU002_01860Not AvailableNegative447666 - 44915955584.4
type vi secretion system contractile sheath small subunitDU002_01865Not AvailableNegative449156 - 44966819439.4
type vi secretion system protein tssaDU002_01870Not AvailableNegative449737 - 45082239557.4
serine/threonine-protein phosphataseDU002_01875Not AvailableNegative450895 - 45171029651.2
type vi secretion system-associated protein tagfDU002_01880Not AvailableNegative451704 - 45239625493.9

Displaying genes 371 – 380 of 3819 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.