Corallincola holothuriorum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Psychromonadaceae

Genus

Corallincola

Description

Corallincola holothuriorum is characterized by having a single replicon. The genetic information for this species is cataloged under the accession number QPID00000000.1. This unique genetic configuration suggests a streamlined genomic architecture, which may be advantageous for its adaptation to specific environmental conditions. As a member of its ecological niche, Corallincola holothuriorum likely plays a role in its habitat dynamics, although specific ecological functions are not detailed in the provided data. The presence of a single replicon may indicate a simplified metabolic pathway, potentially allowing for efficient resource utilization in its environment. Understanding the genomic structure of Corallincola holothuriorum could provide insights into its evolutionary adaptations and ecological interactions. The relationship between its genetic traits and ecological roles remains a topic for further research, as the implications of its single replicon on adaptability and survival in diverse marine ecosystems are not fully explored in the available evidence.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPsychromonadaceae
GenusCorallincola
SpeciesCorallincola holothuriorum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corallincola holothuriorum strain C4 Scaffold30, whole genome

Gene Summary

Adenine Count

1068640 bp

Thymine Count

1129277 bp

Guanine Count

1099698 bp

Cytosine Count

1010632 bp

Genome Length

4308247 bp

Protein-coding Genes

3748 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family intramembrane serine proteaseDU002_01380Not AvailableNegative340218 - 34139042937.9
ribonuclease eDU002_01385Not AvailableNegative341551 - 344496106766.0
23s rrna pseudouridine(955/2504/2580) synthase rlucDU002_01390Not AvailablePositive344983 - 34601138672.2
had family hydrolaseDU002_01395Not AvailablePositive346008 - 34667624228.2
abc transporter atp-binding proteinDU002_01400Not AvailableNegative346673 - 34846666094.8
gaf domain-containing proteinDU002_01405Not AvailablePositive348586 - 34905017115.4
rna chaperone proqDU002_01410Not AvailablePositive349093 - 34972823158.9
carboxy terminal-processing peptidaseDU002_01415Not AvailablePositive349751 - 35179977562.9
na+/h+ antiporter nhacDU002_01420Not AvailablePositive351941 - 35342552107.2
aminopeptidase nDU002_01425Not AvailablePositive353425 - 35604397713.3

Displaying genes 281 – 290 of 3819 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.