Microbacterium sp. ABRD28

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. ABRD28 is a rod-shaped bacterium characterized by a single replicon, indicating a simpler genomic structure compared to organisms with multiple replicons. The strain is cataloged under the accession number NZ_CP031015.1, which provides a reference for its genomic sequence and related research. Microbacterium species are often found in diverse environments, including soil, water, and plant surfaces, where they can play significant roles in nutrient cycling and organic matter decomposition. Their rod shape may contribute to their adaptability and survival in various ecological niches. The presence of a single replicon suggests a streamlined method of replication and regulation, which can be advantageous in specific environments where rapid adaptation is necessary. Understanding the characteristics of Microbacterium sp. ABRD28 can offer insights into its ecological roles, particularly in soil health and microbial communities. The study of this bacterium may also contribute to the broader understanding of microbial diversity and functionality within ecosystems, especially given the importance of microbial interactions in maintaining ecological balance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. ABRD28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. ABRD28 isolate ABRD_28 chromosome, complete

Gene Summary

Adenine Count

495437 bp

Thymine Count

493489 bp

Guanine Count

1138755 bp

Cytosine Count

1138984 bp

Genome Length

3266665 bp

Protein-coding Genes

3123 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polyprenyl synthetase family proteinDT073_RS11595Not AvailablePositive2391847 - 239290236123.9
phytoene/squalene synthase family proteinDT073_RS11600Not AvailablePositive2392899 - 239378031541.2
phytoene desaturase family proteinDT073_RS11605Not AvailablePositive2393777 - 239535156811.7
lycopene cyclase domain-containing proteinDT073_RS11610Not AvailablePositive2395353 - 239570613039.2
lycopene cyclase domain-containing proteinDT073_RS11615Not AvailablePositive2395703 - 239602311462.3
prenyltransferaseDT073_RS11620Not AvailablePositive2396020 - 239691932627.9
upf0182 family proteinDT073_RS11625Not AvailableNegative2397020 - 2399950107217.0
pdz domain-containing proteinDT073_RS11630Not AvailableNegative2400030 - 240117239554.5
zinc-dependent metalloproteaseDT073_RS11635Not AvailablePositive2401370 - 240268346918.7
atp-dependent helicaseDT073_RS11640Not AvailableNegative2403449 - 240526365371.7

Displaying genes 2341 – 2350 of 3175 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.