Pseudomonas sp. SST3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. SST3 is characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for this strain is accessible under the accession QORI00000000.2, which allows for further study and analysis. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant surfaces. This adaptability is often linked to their capacity to degrade a wide range of organic compounds, making them important players in bioremediation processes. The presence of a single replicon in Pseudomonas sp. SST3 suggests potential efficiency in its replication and resource utilization, which could enhance its survival in competitive environments. Overall, the traits of Pseudomonas sp. SST3 underscore its potential ecological significance, particularly in nutrient cycling and the degradation of pollutants. The information available through accession QORI00000000.2 can provide valuable insights into the genetic and metabolic pathways that facilitate these ecological roles, paving the way for future research on its applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SST3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SST3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SST3 SST3_245, whole genome shotgun sequence.

Gene Summary

Adenine Count

1129105 bp

Thymine Count

1114324 bp

Guanine Count

1668552 bp

Cytosine Count

1688966 bp

Genome Length

5601070 bp

Protein-coding Genes

4775 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alkene reductaseDQ405_005095Not AvailablePositive1061251 - 106237541082.5
llm class oxidoreductaseDQ405_005100Not AvailablePositive1062442 - 106342536758.0
helix-turn-helix transcriptional regulatorDQ405_005105Not AvailablePositive1063564 - 106386911516.8
excinuclease abc subunit uvraDQ405_005120Not AvailableNegative1066731 - 106938295512.7
helicase c2DQ405_005125Not AvailableNegative1069461 - 106996718961.2
alcohol dehydrogenase catalytic domain-containing proteinDQ405_005135Not AvailableNegative1072272 - 107341140650.3
is3 family transposaseDQ405_005140Not AvailableNegative1073719 - 107494146498.5
lysr family transcriptional regulatorDQ405_005145Not AvailableNegative1075095 - 107600933741.8
sdr family oxidoreductaseDQ405_005150Not AvailablePositive1076154 - 107689726219.3
metal-sensing transcriptional repressorDQ405_005155Not AvailablePositive1076958 - 10771828151.62

Displaying genes 961 – 970 of 4851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.