Pseudomonas sp. SST3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. SST3 is characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for this strain is accessible under the accession QORI00000000.2, which allows for further study and analysis. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant surfaces. This adaptability is often linked to their capacity to degrade a wide range of organic compounds, making them important players in bioremediation processes. The presence of a single replicon in Pseudomonas sp. SST3 suggests potential efficiency in its replication and resource utilization, which could enhance its survival in competitive environments. Overall, the traits of Pseudomonas sp. SST3 underscore its potential ecological significance, particularly in nutrient cycling and the degradation of pollutants. The information available through accession QORI00000000.2 can provide valuable insights into the genetic and metabolic pathways that facilitate these ecological roles, paving the way for future research on its applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SST3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SST3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SST3 SST3_245, whole genome shotgun sequence.

Gene Summary

Adenine Count

1129105 bp

Thymine Count

1114324 bp

Guanine Count

1668552 bp

Cytosine Count

1688966 bp

Genome Length

5601070 bp

Protein-coding Genes

4775 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metallophosphoesterase family proteinDQ405_002935Not AvailablePositive611733 - 61218816347.0
yitt family proteinDQ405_002940Not AvailableNegative612193 - 61283723233.2
dihydrofolate reductaseDQ405_002945Not AvailableNegative612932 - 61344719274.0
glycerophosphodiester phosphodiesteraseDQ405_002950Not AvailablePositive613599 - 61472041222.3
tripartite tricarboxylate transporter substrate binding proteinDQ405_002955Not AvailablePositive614900 - 61588034675.5
coa transferaseDQ405_002960Not AvailableNegative616090 - 61728343026.4
tripartite tricarboxylate transporter tctb family proteinDQ405_002970Not AvailablePositive618518 - 61901518066.6
c4-dicarboxylate abc transporter permeaseDQ405_002975Not AvailablePositive619043 - 62052152119.2
duf4282 domain-containing proteinDQ405_002980Not AvailableNegative620621 - 6208668898.44
duf2868 domain-containing proteinDQ405_002985Not AvailablePositive621070 - 62246450504.5

Displaying genes 561 – 570 of 4851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.