Pseudomonas sp. SST3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. SST3 is characterized by a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. The genomic data for this strain is accessible under the accession QORI00000000.2, which allows for further study and analysis. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse ecological niches, including soil, water, and plant surfaces. This adaptability is often linked to their capacity to degrade a wide range of organic compounds, making them important players in bioremediation processes. The presence of a single replicon in Pseudomonas sp. SST3 suggests potential efficiency in its replication and resource utilization, which could enhance its survival in competitive environments. Overall, the traits of Pseudomonas sp. SST3 underscore its potential ecological significance, particularly in nutrient cycling and the degradation of pollutants. The information available through accession QORI00000000.2 can provide valuable insights into the genetic and metabolic pathways that facilitate these ecological roles, paving the way for future research on its applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. SST3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. SST3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. SST3 SST3_245, whole genome shotgun sequence.

Gene Summary

Adenine Count

1129105 bp

Thymine Count

1114324 bp

Guanine Count

1668552 bp

Cytosine Count

1688966 bp

Genome Length

5601070 bp

Protein-coding Genes

4775 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDQ405_001760Not AvailableNegative356831 - 3570648158.69
dtdp-glucose 4,6-dehydrataseDQ405_001765Not AvailablePositive357444 - 35851440257.4
glucose-1-phosphate thymidylyltransferase rfbaDQ405_001770Not AvailablePositive358511 - 35938332204.3
dtdp-4-dehydrorhamnose 3,5-epimeraseDQ405_001775Not AvailablePositive359380 - 35992520489.2
sensor histidine kinaseDQ405_001785Not AvailablePositive360935 - 36273467214.7
sigma-54-dependent fis family transcriptional regulatorDQ405_001790Not AvailablePositive362736 - 36412750446.6
trap transporter substrate-binding proteinDQ405_001795Not AvailablePositive364512 - 36550436436.6
trap transporter small permeaseDQ405_001800Not AvailablePositive365743 - 36636923012.1
trap transporter large permeaseDQ405_001805Not AvailablePositive366370 - 36765044749.5
2og-fe(ii) oxygenaseDQ405_001810Not AvailableNegative367728 - 36833622966.1

Displaying genes 341 – 350 of 4851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.