Streptomyces sp. YIM 130001

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. YIM 130001 is a species belonging to the genus Streptomyces, which is well-known for its significant role in natural product biosynthesis. A notable trait of this strain is the presence of flagella, indicating it possesses the ability to move, which may influence its ecological interactions and adaptation to various environments. The organism has a single replicon, suggesting a streamlined genetic structure that could be advantageous for maintaining stability and efficiency in its cellular processes. Its genomic information is cataloged under the accession number QODG00000000.1, which provides a reference for further studies on its genetics and potential applications. The presence of flagella can enhance the motility of Streptomyces sp. YIM 130001, potentially aiding in its colonization of various substrates or environments. This motility may also facilitate the search for nutrients or the establishment of symbiotic relationships with other microorganisms. In summary, Streptomyces sp. YIM 130001 is distinguished by its flagella and single replicon, characteristics that may play a critical role in its ecological behavior and interactions within microbial communities. Understanding these traits can provide insights into the organism's ecological niche and its contributions to soil health and biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. YIM 130001
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. YIM 130001
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. YIM 130001 c80, whole genome shotgun sequence.

Gene Summary

Adenine Count

1168151 bp

Thymine Count

1178870 bp

Guanine Count

2844935 bp

Cytosine Count

2833371 bp

Genome Length

8025327 bp

Protein-coding Genes

7003 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cupin domain proteinDSC45_03190Not AvailableNegative675643 - 67618819545.9
cytochrome p450 107b1DSC45_03195Not AvailableNegative676185 - 67748346701.7
alpha-pyrone synthesis polyketide synthase-like pks11DSC45_03200Not AvailableNegative677473 - 67852838333.9
putative propionyl-coa carboxylase beta chain 5DSC45_03205Not AvailablePositive678826 - 68049059140.6
lipopolysaccharide kinase (kdo/waap) family proteinDSC45_03210Not AvailableNegative680503 - 68175946905.5
putative hth-type transcriptional regulatorDSC45_03215Not AvailableNegative681981 - 68377164660.3
putative o-methyltransferaseDSC45_03220Not AvailablePositive684038 - 68461920696.6
putative diguanylate cyclaseDSC45_03225Not AvailableNegative684638 - 68681877932.6
atp-dependent clp protease atp-binding subunit clpcDSC45_03230Not AvailableNegative686912 - 68948892539.2
lyse type translocatorDSC45_03235Not AvailableNegative689687 - 69031620922.9

Displaying genes 641 – 650 of 7073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.