Streptomyces sp. YIM 130001

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. YIM 130001 is a species belonging to the genus Streptomyces, which is well-known for its significant role in natural product biosynthesis. A notable trait of this strain is the presence of flagella, indicating it possesses the ability to move, which may influence its ecological interactions and adaptation to various environments. The organism has a single replicon, suggesting a streamlined genetic structure that could be advantageous for maintaining stability and efficiency in its cellular processes. Its genomic information is cataloged under the accession number QODG00000000.1, which provides a reference for further studies on its genetics and potential applications. The presence of flagella can enhance the motility of Streptomyces sp. YIM 130001, potentially aiding in its colonization of various substrates or environments. This motility may also facilitate the search for nutrients or the establishment of symbiotic relationships with other microorganisms. In summary, Streptomyces sp. YIM 130001 is distinguished by its flagella and single replicon, characteristics that may play a critical role in its ecological behavior and interactions within microbial communities. Understanding these traits can provide insights into the organism's ecological niche and its contributions to soil health and biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. YIM 130001
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. YIM 130001
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. YIM 130001 c80, whole genome shotgun sequence.

Gene Summary

Adenine Count

1168151 bp

Thymine Count

1178870 bp

Guanine Count

2844935 bp

Cytosine Count

2833371 bp

Genome Length

8025327 bp

Protein-coding Genes

7003 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pap2 superfamily proteinDSC45_30455Not AvailableNegative6895221 - 689590423777.7
4-aminobutyrate aminotransferase gabtDSC45_30460Not AvailableNegative6896358 - 689769246679.8
hypothetical proteinDSC45_30465Not AvailablePositive6898039 - 690023477906.5
purine catabolism regulatory proteinDSC45_30470Not AvailablePositive6900478 - 690212757201.1
nadp-dependent glyceraldehyde-3-phosphate dehydrogenaseDSC45_30475Not AvailablePositive6902309 - 690376051593.1
hypothetical proteinDSC45_30480Not AvailableNegative6903845 - 69040578359.15
2-hydroxymuconate semialdehyde hydrolaseDSC45_30485Not AvailableNegative6904152 - 690508433202.4
transcriptional regulator, tetr familyDSC45_30490Not AvailablePositive6905167 - 690586824482.4
acyl-coa dehydrogenaseDSC45_30495Not AvailablePositive6906031 - 690798071404.1
1-deoxy-d-xylulose 5-phosphate reductoisomeraseDSC45_30500Not AvailablePositive6908077 - 690936044420.8

Displaying genes 6081 – 6090 of 7073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.