Streptomyces sp. YIM 130001

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces sp. YIM 130001 is a species belonging to the genus Streptomyces, which is well-known for its significant role in natural product biosynthesis. A notable trait of this strain is the presence of flagella, indicating it possesses the ability to move, which may influence its ecological interactions and adaptation to various environments. The organism has a single replicon, suggesting a streamlined genetic structure that could be advantageous for maintaining stability and efficiency in its cellular processes. Its genomic information is cataloged under the accession number QODG00000000.1, which provides a reference for further studies on its genetics and potential applications. The presence of flagella can enhance the motility of Streptomyces sp. YIM 130001, potentially aiding in its colonization of various substrates or environments. This motility may also facilitate the search for nutrients or the establishment of symbiotic relationships with other microorganisms. In summary, Streptomyces sp. YIM 130001 is distinguished by its flagella and single replicon, characteristics that may play a critical role in its ecological behavior and interactions within microbial communities. Understanding these traits can provide insights into the organism's ecological niche and its contributions to soil health and biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. YIM 130001
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces sp. YIM 130001
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces sp. YIM 130001 c80, whole genome shotgun sequence.

Gene Summary

Adenine Count

1168151 bp

Thymine Count

1178870 bp

Guanine Count

2844935 bp

Cytosine Count

2833371 bp

Genome Length

8025327 bp

Protein-coding Genes

7003 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDSC45_06200Not AvailableNegative1363752 - 136474134863.4
polyketide cyclase / dehydrase and lipid transportDSC45_06205Not AvailablePositive1365089 - 136549914669.1
collagen triple helix repeat (20 copies)DSC45_06210Not AvailableNegative1365704 - 136656728248.9
methylmalonate-semialdehyde dehydrogenaseDSC45_06215Not AvailableNegative1366753 - 136826452519.2
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolaseDSC45_06220Not AvailableNegative1368299 - 137020668483.6
5-deoxy-glucuronate isomeraseDSC45_06225Not AvailableNegative1370203 - 137101828974.8
hypothetical proteinDSC45_06230Not AvailableNegative1371018 - 137191731348.7
5-dehydro-2-deoxygluconokinaseDSC45_06235Not AvailableNegative1371914 - 137294836077.9
inosose dehydrataseDSC45_06240Not AvailablePositive1373117 - 137401333310.3
hypothetical proteinDSC45_06245Not AvailablePositive1374295 - 13744927844.33

Displaying genes 1241 – 1250 of 7073 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.