Chitinophaga flava str. GDMCC 1.1325

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga flava str. GDMCC 1.1325 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a streamlined genomic architecture that may contribute to its efficiency in various ecological niches. The specific accession number for this strain is QFFJ00000000.1, which serves as a unique identifier for research and reference purposes. As a member of the Chitinophaga genus, this bacterium is likely involved in the degradation of chitin, a polysaccharide found in the exoskeletons of arthropods and in fungal cell walls. The ability to break down chitin is ecologically significant, as it plays a crucial role in nutrient cycling within ecosystems by facilitating the decomposition of organic matter. This process supports soil health and biodiversity by returning essential nutrients to the environment. In summary, Chitinophaga flava str. GDMCC 1.1325, with its Gram-negative, rod-shaped characteristics and single replicon, is part of a microbial group that contributes to the decomposition of chitinous materials, highlighting its potential importance in ecological sustainability and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga flava
StrainGDMCC 1.1325

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga flava strain GDMCC 1.1325 contig5, whole genome

Gene Summary

Adenine Count

2244210 bp

Thymine Count

2216823 bp

Guanine Count

1947033 bp

Cytosine Count

1941515 bp

Genome Length

8349581 bp

Protein-coding Genes

6291 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDF182_30035Not AvailablePositive7733081 - 773353917647.9
duf3817 domain-containing proteinDF182_30040Not AvailablePositive7733541 - 773384911641.9
crp/fnr family transcriptional regulatorDF182_30045Not AvailableNegative7733873 - 773444222122.7
d-cysteine desulfhydraseDF182_30050Not AvailableNegative7734459 - 773546936401.9
endo-beta-n-acetylglucosaminidaseDF182_30055Not AvailablePositive7735817 - 773683036748.4
hypothetical proteinDF182_30060Not AvailableNegative7737029 - 773742414430.3
arac family transcriptional regulatorDF182_30065Not AvailablePositive7738089 - 773890730703.0
hypothetical proteinDF182_30070Not AvailableNegative7738916 - 773933215659.5
multidrug abc transporter atp-binding proteinDF182_30075Not AvailableNegative7739426 - 774119264769.2
diaminobutyrate--2-oxoglutarate transaminaseDF182_30080Not AvailableNegative7741229 - 774251847193.7

Displaying genes 5981 – 5990 of 6380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.