Chitinophaga flava str. GDMCC 1.1325

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga flava str. GDMCC 1.1325 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a streamlined genomic architecture that may contribute to its efficiency in various ecological niches. The specific accession number for this strain is QFFJ00000000.1, which serves as a unique identifier for research and reference purposes. As a member of the Chitinophaga genus, this bacterium is likely involved in the degradation of chitin, a polysaccharide found in the exoskeletons of arthropods and in fungal cell walls. The ability to break down chitin is ecologically significant, as it plays a crucial role in nutrient cycling within ecosystems by facilitating the decomposition of organic matter. This process supports soil health and biodiversity by returning essential nutrients to the environment. In summary, Chitinophaga flava str. GDMCC 1.1325, with its Gram-negative, rod-shaped characteristics and single replicon, is part of a microbial group that contributes to the decomposition of chitinous materials, highlighting its potential importance in ecological sustainability and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga flava
StrainGDMCC 1.1325

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga flava strain GDMCC 1.1325 contig5, whole genome

Gene Summary

Adenine Count

2244210 bp

Thymine Count

2216823 bp

Guanine Count

1947033 bp

Cytosine Count

1941515 bp

Genome Length

8349581 bp

Protein-coding Genes

6291 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydrogenaseDF182_23785Not AvailableNegative5877764 - 587883738871.7
2-isopropylmalate synthaseDF182_23790Not AvailableNegative5878863 - 588038656271.5
3-isopropylmalate dehydratase small subunitDF182_23795Not AvailableNegative5880407 - 588100322207.3
3-isopropylmalate dehydratase large subunitDF182_23800Not AvailableNegative5881039 - 588244250384.4
hypothetical proteinDF182_23805Not AvailableNegative5882838 - 588425352580.6
deor family transcriptional regulatorDF182_23810Not AvailableNegative5884293 - 588506928453.8
susc/raga family tonb-linked outer membrane proteinDF182_23815Not AvailablePositive5885414 - 5888581114257.0
susd/ragb family nutrient-binding outer membrane lipoproteinDF182_23820Not AvailablePositive5888606 - 589015357203.7
beta-hexosaminidaseDF182_23825Not AvailablePositive5890155 - 589240483405.2
gluconate transporterDF182_23830Not AvailablePositive5892453 - 589377246491.2

Displaying genes 4741 – 4750 of 6380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.