Chitinophaga flava str. GDMCC 1.1325

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga flava str. GDMCC 1.1325 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a streamlined genomic architecture that may contribute to its efficiency in various ecological niches. The specific accession number for this strain is QFFJ00000000.1, which serves as a unique identifier for research and reference purposes. As a member of the Chitinophaga genus, this bacterium is likely involved in the degradation of chitin, a polysaccharide found in the exoskeletons of arthropods and in fungal cell walls. The ability to break down chitin is ecologically significant, as it plays a crucial role in nutrient cycling within ecosystems by facilitating the decomposition of organic matter. This process supports soil health and biodiversity by returning essential nutrients to the environment. In summary, Chitinophaga flava str. GDMCC 1.1325, with its Gram-negative, rod-shaped characteristics and single replicon, is part of a microbial group that contributes to the decomposition of chitinous materials, highlighting its potential importance in ecological sustainability and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga flava
StrainGDMCC 1.1325

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga flava strain GDMCC 1.1325 contig5, whole genome

Gene Summary

Adenine Count

2244210 bp

Thymine Count

2216823 bp

Guanine Count

1947033 bp

Cytosine Count

1941515 bp

Genome Length

8349581 bp

Protein-coding Genes

6291 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
epimeraseDF182_22935Not AvailableNegative5658460 - 565935031105.4
class i fructose-bisphosphate aldolaseDF182_22940Not AvailablePositive5659468 - 566054138526.9
hypothetical proteinDF182_22945Not AvailablePositive5661001 - 5664387123329.0
glutamate-5-semialdehyde dehydrogenaseDF182_22950Not AvailableNegative5664575 - 566582545340.5
glutamate 5-kinaseDF182_22955Not AvailableNegative5665835 - 566686937143.1
class a beta-lactamase, subclass a2DF182_22960Not AvailablePositive5666967 - 566794736370.2
dna-binding response regulatorDF182_22965Not AvailablePositive5667985 - 566866525445.1
two-component sensor histidine kinaseDF182_22970Not AvailablePositive5668668 - 567003551545.8
efflux rnd transporter periplasmic adaptor subunitDF182_22975Not AvailablePositive5670769 - 567187539929.0
cusa/czca family heavy metal efflux rnd transporterDF182_22980Not AvailablePositive5671883 - 5674963112929.0

Displaying genes 4571 – 4580 of 6380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.