Chitinophaga flava str. GDMCC 1.1325

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga flava str. GDMCC 1.1325 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a streamlined genomic architecture that may contribute to its efficiency in various ecological niches. The specific accession number for this strain is QFFJ00000000.1, which serves as a unique identifier for research and reference purposes. As a member of the Chitinophaga genus, this bacterium is likely involved in the degradation of chitin, a polysaccharide found in the exoskeletons of arthropods and in fungal cell walls. The ability to break down chitin is ecologically significant, as it plays a crucial role in nutrient cycling within ecosystems by facilitating the decomposition of organic matter. This process supports soil health and biodiversity by returning essential nutrients to the environment. In summary, Chitinophaga flava str. GDMCC 1.1325, with its Gram-negative, rod-shaped characteristics and single replicon, is part of a microbial group that contributes to the decomposition of chitinous materials, highlighting its potential importance in ecological sustainability and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga flava
StrainGDMCC 1.1325

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga flava strain GDMCC 1.1325 contig5, whole genome

Gene Summary

Adenine Count

2244210 bp

Thymine Count

2216823 bp

Guanine Count

1947033 bp

Cytosine Count

1941515 bp

Genome Length

8349581 bp

Protein-coding Genes

6291 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneDF182_13025Not AvailablePositive3248786 - 32489656825.29
cytochrome cDF182_13030Not AvailablePositive3248943 - 325005239848.6
cytochrome c oxidase accessory protein ccogDF182_13035Not AvailablePositive3250057 - 325144552259.6
hypothetical proteinDF182_13040Not AvailablePositive3251472 - 325190916532.0
hypothetical proteinDF182_13045Not AvailablePositive3251932 - 325263924956.8
oxygen-independent coproporphyrinogen iii oxidaseDF182_13050Not AvailablePositive3252642 - 325400351666.1
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseDF182_13055Not AvailablePositive3254514 - 325545833899.2
hypothetical proteinDF182_13060Not AvailablePositive3255558 - 325623825161.2
3-beta hydroxysteroid dehydrogenaseDF182_13065Not AvailableNegative3256242 - 325721935982.5
3-hydroxybutyryl-coa dehydrogenaseDF182_13070Not AvailableNegative3257325 - 325817330815.3

Displaying genes 2611 – 2620 of 6380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.