Chitinophaga flava str. GDMCC 1.1325

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga flava str. GDMCC 1.1325 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, indicating a streamlined genomic architecture that may contribute to its efficiency in various ecological niches. The specific accession number for this strain is QFFJ00000000.1, which serves as a unique identifier for research and reference purposes. As a member of the Chitinophaga genus, this bacterium is likely involved in the degradation of chitin, a polysaccharide found in the exoskeletons of arthropods and in fungal cell walls. The ability to break down chitin is ecologically significant, as it plays a crucial role in nutrient cycling within ecosystems by facilitating the decomposition of organic matter. This process supports soil health and biodiversity by returning essential nutrients to the environment. In summary, Chitinophaga flava str. GDMCC 1.1325, with its Gram-negative, rod-shaped characteristics and single replicon, is part of a microbial group that contributes to the decomposition of chitinous materials, highlighting its potential importance in ecological sustainability and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga flava
StrainGDMCC 1.1325

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga flava strain GDMCC 1.1325 contig5, whole genome

Gene Summary

Adenine Count

2244210 bp

Thymine Count

2216823 bp

Guanine Count

1947033 bp

Cytosine Count

1941515 bp

Genome Length

8349581 bp

Protein-coding Genes

6291 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tmrna,resume consensus sequence (at 90): tttatatggcgaatctaaNot AvailableNot AvailablePositive1554763 - 1555134Not Available
rip metalloprotease rsepDF182_06195Not AvailableNegative1555218 - 155656450786.8
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDF182_06200Not AvailableNegative1556651 - 155782642976.6
hypothetical proteinDF182_06205Not AvailableNegative1557912 - 155941156944.4
50s ribosomal protein l21DF182_06210Not AvailablePositive1559817 - 156011911253.0
50s ribosomal protein l27DF182_06215Not AvailablePositive1560171 - 15604499909.81
histoneDF182_06220Not AvailablePositive1560514 - 156092413402.3
histidinol-phosphataseDF182_06225Not AvailablePositive1561330 - 156301863010.6
prsw family intramembrane metalloproteaseDF182_06230Not AvailablePositive1563015 - 156375827584.2
hypothetical proteinDF182_06235Not AvailablePositive1563848 - 156448324488.3

Displaying genes 1251 – 1260 of 6380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.