Geodermatophilus sp. TF02-6

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. TF02-6 is characterized as a cocci-shaped bacterium, which indicates a spherical morphology. The presence of flagella suggests that this organism is motile, allowing it to navigate its environment effectively. Genetically, Geodermatophilus sp. TF02-6 has a single replicon, which is indicative of its genomic organization. The accession number for Geodermatophilus sp. TF02-6 is QOHF00000000.1, which provides a reference point for researchers seeking to access its genomic information. This specific strain is part of a broader group known for thriving in extreme environments, often found in soil and desert habitats. An ecological insight into Geodermatophilus sp. TF02-6 relates to its ability to adapt to harsh conditions. Such adaptations may involve unique metabolic pathways or resistance mechanisms that allow it to survive in environments where nutrients are scarce and conditions are extreme. The motility conferred by its flagella may also play a significant role in its ecological interactions, potentially aiding in nutrient acquisition or colonization of specific niches within its environment. Understanding these traits can provide deeper insights into the ecological roles of Geodermatophilus sp. and its contributions to soil microbiomes and nutrient cycles.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. TF02-6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. TF02-6 NODE_3163_length_973_cov_1669.431442,

Gene Summary

Adenine Count

596853 bp

Thymine Count

597042 bp

Guanine Count

1764391 bp

Cytosine Count

1767076 bp

Genome Length

4725362 bp

Protein-coding Genes

4244 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
superoxide dismutase, niDQ238_04805Not AvailableNegative1026203 - 102660415224.1
s26 family signal peptidaseDQ238_04810Not AvailablePositive1026749 - 102705110768.2
dtdp-4-dehydrorhamnose 3,5-epimeraseDQ238_04815Not AvailableNegative1027024 - 102762921483.5
nad-dependent malic enzymeDQ238_04820Not AvailablePositive1027758 - 102894840295.3
d-glycerate dehydrogenaseDQ238_04825Not AvailableNegative1029029 - 102994931605.3
metal-dependent hydrolaseDQ238_04830Not AvailableNegative1030029 - 103074224519.1
hypothetical proteinDQ238_04835Not AvailableNegative1030931 - 10311106693.65
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunitDQ238_04840Not AvailableNegative1031150 - 1035004140148.0
abc transporter permeaseDQ238_04850Not AvailableNegative1036099 - 103686626302.8
abc transporter atp-binding proteinDQ238_04855Not AvailableNegative1036863 - 103784634262.1

Displaying genes 921 – 930 of 4299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.