Geodermatophilus sp. TF02-6

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Geodermatophilales

Family

Geodermatophilaceae

Genus

Geodermatophilus

Description

Geodermatophilus sp. TF02-6 is characterized as a cocci-shaped bacterium, which indicates a spherical morphology. The presence of flagella suggests that this organism is motile, allowing it to navigate its environment effectively. Genetically, Geodermatophilus sp. TF02-6 has a single replicon, which is indicative of its genomic organization. The accession number for Geodermatophilus sp. TF02-6 is QOHF00000000.1, which provides a reference point for researchers seeking to access its genomic information. This specific strain is part of a broader group known for thriving in extreme environments, often found in soil and desert habitats. An ecological insight into Geodermatophilus sp. TF02-6 relates to its ability to adapt to harsh conditions. Such adaptations may involve unique metabolic pathways or resistance mechanisms that allow it to survive in environments where nutrients are scarce and conditions are extreme. The motility conferred by its flagella may also play a significant role in its ecological interactions, potentially aiding in nutrient acquisition or colonization of specific niches within its environment. Understanding these traits can provide deeper insights into the ecological roles of Geodermatophilus sp. and its contributions to soil microbiomes and nutrient cycles.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderGeodermatophilales
FamilyGeodermatophilaceae
GenusGeodermatophilus
SpeciesGeodermatophilus sp. TF02-6
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geodermatophilus sp. TF02-6 NODE_3163_length_973_cov_1669.431442,

Gene Summary

Adenine Count

596853 bp

Thymine Count

597042 bp

Guanine Count

1764391 bp

Cytosine Count

1767076 bp

Genome Length

4725362 bp

Protein-coding Genes

4244 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-deoxy-glucuronate isomeraseDQ238_00465Not AvailablePositive91546 - 9253234746.7
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)DQ238_00470Not AvailablePositive92529 - 9445768439.1
2-keto-myo-inositol dehydrataseDQ238_00475Not AvailablePositive94482 - 9548337167.5
inositol 2-dehydrogenaseDQ238_00480Not AvailablePositive95519 - 9655336509.5
sugar phosphate isomerase/epimeraseDQ238_00485Not AvailablePositive96550 - 9742532209.3
methylmalonate-semialdehyde dehydrogenase (coa acylating)DQ238_00490Not AvailablePositive97437 - 9893052993.9
hypothetical proteinDQ238_00495Not AvailablePositive99156 - 9962316695.8
mfs transporterDQ238_00500Not AvailablePositive99732 - 10115050438.9
fusc family proteinDQ238_00505Not AvailablePositive101392 - 10274147169.2
hydroxypyruvate isomeraseDQ238_00510Not AvailableNegative102788 - 10359128530.8

Displaying genes 91 – 100 of 4299 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.