Halorubrum sp. 48-1-W str. 48_1_W

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. 48-1-W, designated as strain 48_1_W, is a rod-shaped microorganism belonging to the Archaea domain, specifically within the Halobacteriaceae family. This organism possesses flagella, which are crucial for motility, suggesting an ability to navigate its environment effectively. Genetically, Halorubrum sp. 48-1-W is characterized by having a single replicon, indicating a streamlined genomic organization that is typical for many archaeal species. This trait may facilitate efficient replication and maintenance of its genetic material under various environmental conditions. The strain is cataloged under the accession number QMIM00000000.1, which provides a reference for genomic data and further studies related to its biological functions and characteristics. From an ecological perspective, Halorubrum sp. 48-1-W is likely adapted to extreme environments, a common trait among halophilic archaea. Its rod shape and motility, enabled by flagella, may enhance its ability to thrive in high-salinity habitats, allowing it to exploit ecological niches that are inhospitable to many other microorganisms. This adaptation underscores the ecological significance of Halorubrum sp. 48-1-W in saline environments, where it may play a role in nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. 48-1-W
Strain48_1_W

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. 48-1-W NODE_63_length_1113_cov_15.1333, whole

Gene Summary

Adenine Count

605129 bp

Thymine Count

609706 bp

Guanine Count

1182772 bp

Cytosine Count

1187322 bp

Genome Length

3584929 bp

Protein-coding Genes

3300 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphopyruvate hydrataseDQW50_00290Not AvailableNegative49572 - 5077441981.4
dna-directed rna polymerase subunit kDQW50_00295Not AvailableNegative50771 - 509536655.87
dna-directed rna polymerase subunit nDQW50_00300Not AvailableNegative50956 - 511507374.8
30s ribosomal protein s9DQW50_00305Not AvailableNegative51163 - 5156114515.2
50s ribosomal protein l13DQW50_00310Not AvailableNegative51555 - 5200416337.1
50s ribosomal protein l18eDQW50_00315Not AvailableNegative52001 - 5235412744.0
Trna-leuNot AvailableNot AvailablePositive52393 - 52477Not Available
dna-directed rna polymerase subunit dDQW50_00325Not AvailableNegative52632 - 5338427613.4
30s ribosomal protein s11DQW50_00330Not AvailableNegative53386 - 5377513496.9
30s ribosomal protein s4DQW50_00335Not AvailableNegative53782 - 5430919491.6

Displaying genes 81 – 90 of 3365 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.