Halorubrum sp. 48-1-W str. 48_1_W

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sp. 48-1-W, designated as strain 48_1_W, is a rod-shaped microorganism belonging to the Archaea domain, specifically within the Halobacteriaceae family. This organism possesses flagella, which are crucial for motility, suggesting an ability to navigate its environment effectively. Genetically, Halorubrum sp. 48-1-W is characterized by having a single replicon, indicating a streamlined genomic organization that is typical for many archaeal species. This trait may facilitate efficient replication and maintenance of its genetic material under various environmental conditions. The strain is cataloged under the accession number QMIM00000000.1, which provides a reference for genomic data and further studies related to its biological functions and characteristics. From an ecological perspective, Halorubrum sp. 48-1-W is likely adapted to extreme environments, a common trait among halophilic archaea. Its rod shape and motility, enabled by flagella, may enhance its ability to thrive in high-salinity habitats, allowing it to exploit ecological niches that are inhospitable to many other microorganisms. This adaptation underscores the ecological significance of Halorubrum sp. 48-1-W in saline environments, where it may play a role in nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sp. 48-1-W
Strain48_1_W

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sp. 48-1-W NODE_63_length_1113_cov_15.1333, whole

Gene Summary

Adenine Count

605129 bp

Thymine Count

609706 bp

Guanine Count

1182772 bp

Cytosine Count

1187322 bp

Genome Length

3584929 bp

Protein-coding Genes

3300 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminopeptidase p family proteinDQW50_00190Not AvailableNegative33390 - 3451139898.8
Trna-valNot AvailableNot AvailablePositive34673 - 34747Not Available
metal-dependent hydrolaseDQW50_00200Not AvailableNegative34845 - 3533916425.2
glucose-1-phosphate thymidylyltransferaseDQW50_00205Not AvailableNegative35365 - 3654941661.0
ferredoxinDQW50_00210Not AvailableNegative36652 - 3698112109.0
glutamate--trna ligaseDQW50_00215Not AvailableNegative37051 - 3882365780.9
hypothetical proteinDQW50_00220Not AvailablePositive39231 - 394497841.78
5'/3'-nucleotidase sureDQW50_00225Not AvailableNegative39465 - 4035830953.5
carbamoyl-phosphate synthase small subunitDQW50_00230Not AvailableNegative40600 - 4166137568.4
lrp/asnc family transcriptional regulatorDQW50_00235Not AvailablePositive41927 - 4234015600.5

Displaying genes 61 – 70 of 3365 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.