Sphingomonas sp. FARSPH

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. FARSPH is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. It possesses a total of four replicons, an indication of its genetic complexity, potentially contributing to its adaptability and survival in various environments. The organism is classified under the Sphingomonas genus, which is known for its diverse metabolic capabilities and ecological roles. While specific ecological interactions or habitats of Sphingomonas sp. FARSPH are not detailed, members of this genus are often found in soil, water, and as part of the microbiota in various environments, where they can play significant roles in biogeochemical cycles. The genetic information for Sphingomonas sp. FARSPH is represented in several accession numbers: NZ_CP029986.1, NZ_CP029985.1, NZ_CP029987.1, and NZ_CP029988.1. These accessions can be utilized for further genomic studies or comparisons with other strains, providing insights into the evolutionary relationships and functional capabilities of this bacterium. In summary, Sphingomonas sp. FARSPH, with its rod shape, flagellar motility, and multiple replicons, exemplifies the ecological diversity and metabolic versatility inherent in the Sphingomonas genus. This bacterium may contribute to important ecological processes such as nutrient cycling, underscoring the significance of studying such microorganisms in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. FARSPH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. FARSPH
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. FARSPH plasmid p01, complete sequence.

Gene Summary

Adenine Count

47248 bp

Thymine Count

46196 bp

Guanine Count

85857 bp

Cytosine Count

85920 bp

Genome Length

265221 bp

Protein-coding Genes

272 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hlyd family secretion proteinDM480_RS15225Not AvailableNegative3217184 - 321838342204.1
tetr/acrr family transcriptional regulatorDM480_RS15230Not AvailablePositive3218647 - 321918919537.7
dna mismatch repair endonuclease mutlDM480_RS15235Not AvailableNegative3219219 - 322101264097.1
rod shape-determining proteinDM480_RS15240Not AvailablePositive3221148 - 322218836682.7
rod shape-determining protein mrecDM480_RS15245Not AvailablePositive3222213 - 322312431699.5
rod shape-determining protein mredDM480_RS15250Not AvailablePositive3223121 - 322363918909.8
penicillin-binding protein 2DM480_RS15255Not AvailablePositive3223636 - 322572074452.3
rod shape-determining protein rodaDM480_RS15260Not AvailablePositive3225717 - 322682939902.9
Trna-lysNot AvailableNot AvailablePositive3226924 - 3226999Not Available
duf6481 family proteinDM480_RS15270Not AvailablePositive3227087 - 322744612402.5

Displaying genes 3501 – 3510 of 3618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.