Sphingomonas sp. FARSPH

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. FARSPH is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. It possesses a total of four replicons, an indication of its genetic complexity, potentially contributing to its adaptability and survival in various environments. The organism is classified under the Sphingomonas genus, which is known for its diverse metabolic capabilities and ecological roles. While specific ecological interactions or habitats of Sphingomonas sp. FARSPH are not detailed, members of this genus are often found in soil, water, and as part of the microbiota in various environments, where they can play significant roles in biogeochemical cycles. The genetic information for Sphingomonas sp. FARSPH is represented in several accession numbers: NZ_CP029986.1, NZ_CP029985.1, NZ_CP029987.1, and NZ_CP029988.1. These accessions can be utilized for further genomic studies or comparisons with other strains, providing insights into the evolutionary relationships and functional capabilities of this bacterium. In summary, Sphingomonas sp. FARSPH, with its rod shape, flagellar motility, and multiple replicons, exemplifies the ecological diversity and metabolic versatility inherent in the Sphingomonas genus. This bacterium may contribute to important ecological processes such as nutrient cycling, underscoring the significance of studying such microorganisms in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. FARSPH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. FARSPH
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. FARSPH plasmid p01, complete sequence.

Gene Summary

Adenine Count

47248 bp

Thymine Count

46196 bp

Guanine Count

85857 bp

Cytosine Count

85920 bp

Genome Length

265221 bp

Protein-coding Genes

272 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s8 family peptidaseDM480_RS09640Not AvailableNegative2027457 - 202978178820.9
pyrimidine 5'-nucleotidaseDM480_RS09645Not AvailablePositive2029909 - 203058924583.2
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseDM480_RS09650Not AvailablePositive2030586 - 203140428569.1
carbohydrate porinDM480_RS09655Not AvailablePositive2031523 - 203298952274.8
methyl-accepting chemotaxis proteinDM480_RS09660Not AvailableNegative2033054 - 203491365246.2
class ii fructose-bisphosphataseDM480_RS09665Not AvailablePositive2035281 - 203624633543.5
cpbp family intramembrane glutamic endopeptidaseDM480_RS09670Not AvailablePositive2036243 - 203695624538.7
duf429 domain-containing proteinDM480_RS09675Not AvailableNegative2036925 - 203775229214.9
abc transporter permeaseDM480_RS09680Not AvailableNegative2037847 - 203860827455.3
abc transporter atp-binding proteinDM480_RS09685Not AvailableNegative2038605 - 203953733776.2

Displaying genes 2361 – 2370 of 3618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.