Sphingomonas sp. FARSPH

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. FARSPH is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. It possesses a total of four replicons, an indication of its genetic complexity, potentially contributing to its adaptability and survival in various environments. The organism is classified under the Sphingomonas genus, which is known for its diverse metabolic capabilities and ecological roles. While specific ecological interactions or habitats of Sphingomonas sp. FARSPH are not detailed, members of this genus are often found in soil, water, and as part of the microbiota in various environments, where they can play significant roles in biogeochemical cycles. The genetic information for Sphingomonas sp. FARSPH is represented in several accession numbers: NZ_CP029986.1, NZ_CP029985.1, NZ_CP029987.1, and NZ_CP029988.1. These accessions can be utilized for further genomic studies or comparisons with other strains, providing insights into the evolutionary relationships and functional capabilities of this bacterium. In summary, Sphingomonas sp. FARSPH, with its rod shape, flagellar motility, and multiple replicons, exemplifies the ecological diversity and metabolic versatility inherent in the Sphingomonas genus. This bacterium may contribute to important ecological processes such as nutrient cycling, underscoring the significance of studying such microorganisms in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. FARSPH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. FARSPH
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. FARSPH plasmid p01, complete sequence.

Gene Summary

Adenine Count

47248 bp

Thymine Count

46196 bp

Guanine Count

85857 bp

Cytosine Count

85920 bp

Genome Length

265221 bp

Protein-coding Genes

272 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna 2-thiouridine(34) synthase mnmaDM480_RS09335Not AvailableNegative1943962 - 194506838920.6
hypothetical proteinDM480_RS09340Not AvailablePositive1945193 - 19454358372.18
duf1153 domain-containing proteinDM480_RS09345Not AvailablePositive1945540 - 194583911212.6
ca2+-dependent phosphoinositide-specific phospholipase cDM480_RS09350Not AvailableNegative1945916 - 194703740268.4
tonb-dependent receptorDM480_RS09355Not AvailableNegative1947040 - 194972797019.4
sensor histidine kinaseDM480_RS09360Not AvailableNegative1949864 - 195106040829.5
sigma-54-dependent transcriptional regulatorDM480_RS09365Not AvailableNegative1951050 - 195229442986.9
efflux rnd transporter periplasmic adaptor subunitDM480_RS09370Not AvailablePositive1952465 - 195371243834.8
abc transporter atp-binding proteinDM480_RS09375Not AvailablePositive1953721 - 195440124274.3
abc transporter permeaseDM480_RS09380Not AvailablePositive1954525 - 195694286765.3

Displaying genes 2301 – 2310 of 3618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.