Sphingomonas sp. FARSPH

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. FARSPH is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. It possesses a total of four replicons, an indication of its genetic complexity, potentially contributing to its adaptability and survival in various environments. The organism is classified under the Sphingomonas genus, which is known for its diverse metabolic capabilities and ecological roles. While specific ecological interactions or habitats of Sphingomonas sp. FARSPH are not detailed, members of this genus are often found in soil, water, and as part of the microbiota in various environments, where they can play significant roles in biogeochemical cycles. The genetic information for Sphingomonas sp. FARSPH is represented in several accession numbers: NZ_CP029986.1, NZ_CP029985.1, NZ_CP029987.1, and NZ_CP029988.1. These accessions can be utilized for further genomic studies or comparisons with other strains, providing insights into the evolutionary relationships and functional capabilities of this bacterium. In summary, Sphingomonas sp. FARSPH, with its rod shape, flagellar motility, and multiple replicons, exemplifies the ecological diversity and metabolic versatility inherent in the Sphingomonas genus. This bacterium may contribute to important ecological processes such as nutrient cycling, underscoring the significance of studying such microorganisms in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. FARSPH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. FARSPH
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. FARSPH plasmid p01, complete sequence.

Gene Summary

Adenine Count

47248 bp

Thymine Count

46196 bp

Guanine Count

85857 bp

Cytosine Count

85920 bp

Genome Length

265221 bp

Protein-coding Genes

272 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase factor sigma-54DM480_RS07540Not AvailableNegative1538237 - 153971852903.9
lps export abc transporter atp-binding proteinDM480_RS07545Not AvailableNegative1539885 - 154067628623.6
lpta/osta family proteinDM480_RS07550Not AvailableNegative1540836 - 154139619131.8
lps export abc transporter periplasmic protein lptcDM480_RS07555Not AvailableNegative1541402 - 154204022898.5
ribonuclease dDM480_RS07560Not AvailableNegative1542052 - 154267223053.3
cold-shock proteinDM480_RS18710Not AvailablePositive1542960 - 154379327384.8
glutaminyl-peptide cyclotransferaseDM480_RS07570Not AvailablePositive1543872 - 154467828973.7
duf5946 family proteinDM480_RS07575Not AvailableNegative1544686 - 154518918168.8
duf4336 domain-containing proteinDM480_RS07580Not AvailablePositive1545557 - 154624926137.5
cisplatin damage response atp-dependent dna ligaseDM480_RS07585Not AvailableNegative1546272 - 154786158034.5

Displaying genes 1961 – 1970 of 3618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.