Sphingomonas sp. FARSPH

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. FARSPH is a rod-shaped bacterium characterized by the presence of flagella, which suggests its capability for motility. It possesses a total of four replicons, an indication of its genetic complexity, potentially contributing to its adaptability and survival in various environments. The organism is classified under the Sphingomonas genus, which is known for its diverse metabolic capabilities and ecological roles. While specific ecological interactions or habitats of Sphingomonas sp. FARSPH are not detailed, members of this genus are often found in soil, water, and as part of the microbiota in various environments, where they can play significant roles in biogeochemical cycles. The genetic information for Sphingomonas sp. FARSPH is represented in several accession numbers: NZ_CP029986.1, NZ_CP029985.1, NZ_CP029987.1, and NZ_CP029988.1. These accessions can be utilized for further genomic studies or comparisons with other strains, providing insights into the evolutionary relationships and functional capabilities of this bacterium. In summary, Sphingomonas sp. FARSPH, with its rod shape, flagellar motility, and multiple replicons, exemplifies the ecological diversity and metabolic versatility inherent in the Sphingomonas genus. This bacterium may contribute to important ecological processes such as nutrient cycling, underscoring the significance of studying such microorganisms in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. FARSPH
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. FARSPH
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. FARSPH plasmid p01, complete sequence.

Gene Summary

Adenine Count

47248 bp

Thymine Count

46196 bp

Guanine Count

85857 bp

Cytosine Count

85920 bp

Genome Length

265221 bp

Protein-coding Genes

272 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide biosynthesis proteinDM480_RS05040Not AvailablePositive1043555 - 104504553285.1
cbs domain-containing proteinDM480_RS05045Not AvailableNegative1045050 - 104547515221.6
hypothetical proteinDM480_RS05050Not AvailablePositive1045563 - 104585610054.1
duf4167 domain-containing proteinDM480_RS05055Not AvailableNegative1045979 - 104683931997.1
peptide chain release factor n(5)-glutamine methyltransferaseDM480_RS05060Not AvailableNegative1047158 - 104798829046.8
peptide chain release factor 1DM480_RS05065Not AvailableNegative1048133 - 104920939145.1
histidine--trna ligaseDM480_RS05070Not AvailableNegative1049206 - 105047446947.5
duf1345 domain-containing proteinDM480_RS05075Not AvailablePositive1050524 - 105118023868.4
m61 family metallopeptidaseDM480_RS05080Not AvailablePositive1051412 - 105333170042.6
inorganic diphosphataseDM480_RS05085Not AvailablePositive1053361 - 105394221433.4

Displaying genes 1471 – 1480 of 3618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.