Prochlorococcus marinus XMU1408

Gram-negativeCocciNon-motile

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Prochlorococcaceae

Genus

Prochlorococcus

Description

Prochlorococcus marinus XMU1408 is a free-living, aquatic bacterium known for its photosynthetic capabilities. This species is classified as gram-negative and exhibits a cocci shape. It is characterized by the presence of two membranes and has a single replicon, which is indicative of its genetic structure. Prochlorococcus marinus XMU1408 thrives in mesophilic temperature ranges, suggesting it is well-adapted to moderate environmental conditions. Unlike motile bacteria, this strain does not exhibit mobility, despite having flagella. The absence of mobility could influence its ecological role in aquatic environments, where it relies on water currents for distribution. As a photosynthetic organism, Prochlorococcus marinus XMU1408 plays a significant role in the aquatic ecosystem. It contributes to primary production, serving as a vital source of energy for various marine food webs. The ability to harness sunlight for energy allows this bacterium to thrive in nutrient-poor environments, which are common in the oceanic waters where it is often found. In summary, Prochlorococcus marinus XMU1408 exemplifies the adaptation of microorganisms to specific aquatic habitats, highlighting their importance in energy transfer within marine ecosystems. Its characteristics underscore the complexity and interdependence of microbial life in regulating ecological dynamics.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilyProchlorococcaceae
GenusProchlorococcus
SpeciesProchlorococcus marinus
StrainXMU1408

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Prochlorococcus marinus XMU1408
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourcePhotosynthetic
PathogenicityNot Available

Genome Summary

Prochlorococcus marinus XMU1408


Gene Summary

Adenine Count

590450 bp

Thymine Count

591746 bp

Guanine Count

307476 bp

Cytosine Count

305475 bp

Genome Length

1795147 bp

Protein-coding Genes

1871 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system-like proteinDNJ73_00160Not AvailableNegative31761 - 3216815140.1
hypothetical proteinDNJ73_00165Not AvailablePositive32411 - 325996911.49
aminotransferaseDNJ73_00170Not AvailableNegative32742 - 3389341828.7
cobalt-precorrin-5b (c(1))-methyltransferaseDNJ73_00175Not AvailablePositive33973 - 3511541520.8
gmp synthase (glutamine-hydrolyzing)DNJ73_00180Not AvailablePositive35185 - 3677158910.2
sam-dependent methyltransferaseDNJ73_00185Not AvailableNegative36970 - 3928588904.6
arginine biosynthesis bifunctional protein argjDNJ73_00190Not AvailableNegative39518 - 4075043889.8
dephospho-coa kinaseDNJ73_00195Not AvailablePositive40796 - 4144025103.9
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit bDNJ73_00200Not AvailableNegative41437 - 4291254803.4
glycine oxidase thioDNJ73_00205Not AvailablePositive43012 - 4412741209.4

Displaying genes 31 – 40 of 1915 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

195 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm00006985-dehydro-2-deoxy-D-gluconateC6H9O6Chemical structure of 5-dehydro-2-deoxy-D-gluconateNot available
Average177.133Da
Monoisotopic177.04046159Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00007183-maleylpyruvateC7H4O6Chemical structure of 3-maleylpyruvateNot available
Average184.104Da
Monoisotopic184.001885009Da

Displaying 1–10 of 195 metabolites

Health Effects

No health effects information available for this bacterium.