Vibrio sp. 11986-1-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. 11986-1-5 is characterized by having a single replicon, which is significant in the context of its genetic organization and replication strategy. The accession number for this strain is QHMB00000000.1, indicating its unique identification in genomic databases. As a member of the Vibrio genus, this strain may share common traits with other Vibrio species, such as being rod-shaped and possessing a flagellum, which aids in motility. Vibrio species are typically found in marine environments and are known for their role in aquatic ecosystems, often contributing to nutrient cycling and interactions with other marine organisms. The single replicon structure suggests a streamlined genetic framework, which could be advantageous for survival in fluctuating environmental conditions. This trait may confer specific metabolic capabilities or adaptations that allow Vibrio sp. 11986-1-5 to thrive in its ecological niche. Understanding the genetic characteristics of Vibrio sp. 11986-1-5, such as its single replicon and genomic identification, can provide insights into its ecological role in marine environments. By studying this strain, researchers can better comprehend the dynamics of microbial communities within these ecosystems and the potential impacts of Vibrio species on aquatic health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. 11986-1-5
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. 11986-1-5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. 11986-1-5 NODE_54_length_205_cov_67.1923, whole genome

Gene Summary

Adenine Count

1033695 bp

Thymine Count

1027784 bp

Guanine Count

798750 bp

Cytosine Count

803737 bp

Genome Length

3663966 bp

Protein-coding Genes

3196 genes

Non-Coding Genes

140 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-pseudoNot AvailableNot AvailablePositive3580586 - 3580676Not Available
Trna-metNot AvailableNot AvailablePositive3580718 - 3580794Not Available
Trna-glyNot AvailableNot AvailablePositive3580829 - 3580904Not Available
Trna-metNot AvailableNot AvailablePositive3581117 - 3581193Not Available
trna epoxyqueuosine(34) reductase quegDMC15_16295Not AvailableNegative3581758 - 358287041826.1
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeDMC15_16300Not AvailablePositive3583089 - 358355317533.9
n-acetylmuramoyl-l-alanine amidaseDMC15_16305Not AvailablePositive3583520 - 358527463984.8
dna mismatch repair endonuclease mutlDMC15_16310Not AvailablePositive3585287 - 358720071144.4
trna (adenosine(37)-n6)-dimethylallyltransferase miaaDMC15_16315Not AvailablePositive3587200 - 358813234976.2
rna chaperone hfqDMC15_16320Not AvailablePositive3588325 - 35885889743.72

Displaying genes 3211 – 3220 of 3336 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.