Pseudomonas sp. RW409

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RW409 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number QHHP00000000.1, which serves as a unique identifier for genomic studies and analyses. Pseudomonas species are known for their metabolic diversity and adaptability to various environmental conditions. This particular strain may exhibit traits typical of its genus, such as the ability to degrade a wide range of organic compounds, which can be advantageous in ecological contexts such as bioremediation. The presence of a single replicon suggests a potentially efficient replication process, which may correlate with its adaptability and survival in fluctuating environments. The ecological insight derived from studying Pseudomonas sp. RW409 lies in its potential role in nutrient cycling and the degradation of pollutants. These bacteria are often involved in soil health and can contribute to the maintenance of ecosystem balance by breaking down complex organic materials. Understanding the specific capabilities of Pseudomonas sp. RW409 could provide valuable information on its potential applications in environmental biotechnology, particularly in areas requiring bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RW409
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RW409
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RW409 NODE_115_length_1244240_cov_42.009293, whole

Gene Summary

Adenine Count

1342047 bp

Thymine Count

1337337 bp

Guanine Count

2234438 bp

Cytosine Count

2240123 bp

Genome Length

7154805 bp

Protein-coding Genes

6288 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine/threonine-protein phosphataseDK261_03645Not AvailableNegative795655 - 79638326382.3
type vi secretion system membrane subunit tssmDK261_03650Not AvailableNegative796383 - 799910133342.0
dotu family type iv/vi secretion system proteinDK261_03655Not AvailableNegative799925 - 80079433069.0
type vi secretion system baseplate subunit tsskDK261_03660Not AvailableNegative800800 - 80213149712.6
type vi secretion system lipoprotein tssjDK261_03665Not AvailableNegative802134 - 80263418172.8
type vi secretion system-associated fha domain protein taghDK261_03670Not AvailableNegative802640 - 80383344400.4
type vi secretion proteinDK261_03675Not AvailableNegative803851 - 8039914990.0
sigma-54-dependent fis family transcriptional regulatorDK261_03680Not AvailableNegative804087 - 80560455240.5
type vi secretion system atpase tsshDK261_03685Not AvailableNegative805615 - 80826996191.4
type vi secretion system baseplate subunit tssgDK261_03690Not AvailableNegative808281 - 80928838689.5

Displaying genes 791 – 800 of 6415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.