Pseudomonas sp. RW409

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RW409 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number QHHP00000000.1, which serves as a unique identifier for genomic studies and analyses. Pseudomonas species are known for their metabolic diversity and adaptability to various environmental conditions. This particular strain may exhibit traits typical of its genus, such as the ability to degrade a wide range of organic compounds, which can be advantageous in ecological contexts such as bioremediation. The presence of a single replicon suggests a potentially efficient replication process, which may correlate with its adaptability and survival in fluctuating environments. The ecological insight derived from studying Pseudomonas sp. RW409 lies in its potential role in nutrient cycling and the degradation of pollutants. These bacteria are often involved in soil health and can contribute to the maintenance of ecosystem balance by breaking down complex organic materials. Understanding the specific capabilities of Pseudomonas sp. RW409 could provide valuable information on its potential applications in environmental biotechnology, particularly in areas requiring bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RW409
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RW409
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RW409 NODE_115_length_1244240_cov_42.009293, whole

Gene Summary

Adenine Count

1342047 bp

Thymine Count

1337337 bp

Guanine Count

2234438 bp

Cytosine Count

2240123 bp

Genome Length

7154805 bp

Protein-coding Genes

6288 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorDK261_32350Not AvailablePositive7060905 - 706144720171.3
duf4917 domain-containing proteinDK261_32355Not AvailableNegative7061666 - 706268537888.8
l-threonine dehydrogenaseDK261_32360Not AvailablePositive7062843 - 706399140203.6
type ii toxin-antitoxin system rele/pare family toxinDK261_32365Not AvailableNegative7064051 - 706435011487.8
ribbon-helix-helix protein, copg familyDK261_32370Not AvailableNegative7064340 - 70645798649.17
fosfomycin resistance glutathione transferaseDK261_32375Not AvailablePositive7064716 - 706513215527.3
lysine transporter lyseDK261_32380Not AvailablePositive7065260 - 706589822452.0
sensor domain-containing diguanylate cyclaseDK261_32385Not AvailablePositive7066010 - 706735049715.5
duf4142 domain-containing proteinDK261_32390Not AvailablePositive7067489 - 706801318755.4
protein kinaseDK261_32395Not AvailableNegative7068107 - 706899734969.8

Displaying genes 6331 – 6340 of 6415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.