Pseudomonas sp. RW409

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RW409 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number QHHP00000000.1, which serves as a unique identifier for genomic studies and analyses. Pseudomonas species are known for their metabolic diversity and adaptability to various environmental conditions. This particular strain may exhibit traits typical of its genus, such as the ability to degrade a wide range of organic compounds, which can be advantageous in ecological contexts such as bioremediation. The presence of a single replicon suggests a potentially efficient replication process, which may correlate with its adaptability and survival in fluctuating environments. The ecological insight derived from studying Pseudomonas sp. RW409 lies in its potential role in nutrient cycling and the degradation of pollutants. These bacteria are often involved in soil health and can contribute to the maintenance of ecosystem balance by breaking down complex organic materials. Understanding the specific capabilities of Pseudomonas sp. RW409 could provide valuable information on its potential applications in environmental biotechnology, particularly in areas requiring bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RW409
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RW409
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RW409 NODE_115_length_1244240_cov_42.009293, whole

Gene Summary

Adenine Count

1342047 bp

Thymine Count

1337337 bp

Guanine Count

2234438 bp

Cytosine Count

2240123 bp

Genome Length

7154805 bp

Protein-coding Genes

6288 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorDK261_01230Not AvailableNegative272719 - 27361533993.8
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseDK261_01235Not AvailablePositive273722 - 27483439033.5
s-formylglutathione hydrolaseDK261_01240Not AvailablePositive274923 - 27576831025.7
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseDK261_01245Not AvailablePositive275821 - 27629416738.2
trna pseudouridine(13) synthase trudDK261_01250Not AvailablePositive276291 - 27734938835.3
5'/3'-nucleotidase sureDK261_01255Not AvailablePositive277337 - 27808626442.5
protein-l-isoaspartate(d-aspartate) o-methyltransferaseDK261_01260Not AvailablePositive278086 - 27876325086.6
lysm peptidoglycan-binding domain-containing proteinDK261_01265Not AvailablePositive278973 - 27980629290.1
5s ribosomal rnaNot AvailableNot AvailablePositive279754 - 279869Not Available
rna polymerase sigma factor rposDK261_01270Not AvailablePositive279913 - 28091738079.4

Displaying genes 311 – 320 of 6415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.