Pseudomonas sp. RW409

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RW409 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number QHHP00000000.1, which serves as a unique identifier for genomic studies and analyses. Pseudomonas species are known for their metabolic diversity and adaptability to various environmental conditions. This particular strain may exhibit traits typical of its genus, such as the ability to degrade a wide range of organic compounds, which can be advantageous in ecological contexts such as bioremediation. The presence of a single replicon suggests a potentially efficient replication process, which may correlate with its adaptability and survival in fluctuating environments. The ecological insight derived from studying Pseudomonas sp. RW409 lies in its potential role in nutrient cycling and the degradation of pollutants. These bacteria are often involved in soil health and can contribute to the maintenance of ecosystem balance by breaking down complex organic materials. Understanding the specific capabilities of Pseudomonas sp. RW409 could provide valuable information on its potential applications in environmental biotechnology, particularly in areas requiring bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RW409
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RW409
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RW409 NODE_115_length_1244240_cov_42.009293, whole

Gene Summary

Adenine Count

1342047 bp

Thymine Count

1337337 bp

Guanine Count

2234438 bp

Cytosine Count

2240123 bp

Genome Length

7154805 bp

Protein-coding Genes

6288 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp_00063DK261_00325Not AvailableNegative64068 - 64673Not Available
universal stress protein uspaDK261_00330Not AvailablePositive64901 - 6576431137.6
duf1289 domain-containing proteinDK261_00335Not AvailableNegative65865 - 6633518453.3
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseDK261_00340Not AvailablePositive66806 - 6940693707.7
alpha/beta hydrolaseDK261_00345Not AvailablePositive69764 - 7064532573.0
luxr family transcriptional regulatorDK261_00350Not AvailablePositive70986 - 7171127104.7
acyl-homoserine-lactone synthaseDK261_00355Not AvailablePositive71742 - 7240124416.1
haaap family serine/threonine permeaseDK261_00360Not AvailableNegative72383 - 7366346051.6
formate dehydrogenaseDK261_00365Not AvailableNegative73998 - 742258419.02
formate dehydrogenase subunit alphaDK261_00370Not AvailableNegative74222 - 77098105147.0

Displaying genes 121 – 130 of 6415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.