Pseudomonas sp. RW409

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RW409 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number QHHP00000000.1, which serves as a unique identifier for genomic studies and analyses. Pseudomonas species are known for their metabolic diversity and adaptability to various environmental conditions. This particular strain may exhibit traits typical of its genus, such as the ability to degrade a wide range of organic compounds, which can be advantageous in ecological contexts such as bioremediation. The presence of a single replicon suggests a potentially efficient replication process, which may correlate with its adaptability and survival in fluctuating environments. The ecological insight derived from studying Pseudomonas sp. RW409 lies in its potential role in nutrient cycling and the degradation of pollutants. These bacteria are often involved in soil health and can contribute to the maintenance of ecosystem balance by breaking down complex organic materials. Understanding the specific capabilities of Pseudomonas sp. RW409 could provide valuable information on its potential applications in environmental biotechnology, particularly in areas requiring bioremediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RW409
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RW409
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RW409 NODE_115_length_1244240_cov_42.009293, whole

Gene Summary

Adenine Count

1342047 bp

Thymine Count

1337337 bp

Guanine Count

2234438 bp

Cytosine Count

2240123 bp

Genome Length

7154805 bp

Protein-coding Genes

6288 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidaseDK261_05285Not AvailableNegative1145046 - 114638947002.8
ggdef domain-containing proteinDK261_05290Not AvailableNegative1146553 - 114860477124.8
superoxide dismutaseDK261_05295Not AvailableNegative1148908 - 114950421990.7
amino acid transporterDK261_05300Not AvailableNegative1149681 - 115028321227.3
act domain-containing proteinDK261_05305Not AvailableNegative1150289 - 115069014256.0
lysr family transcriptional regulator argpDK261_05310Not AvailablePositive1150787 - 115168032674.7
duf4354 domain-containing proteinDK261_05320Not AvailableNegative1152120 - 115250013771.4
transporterDK261_05325Not AvailableNegative1152926 - 115448856757.2
hlyd family type i secretion periplasmic adaptor subunitDK261_05330Not AvailableNegative1154490 - 115576447226.1
type i secretion system permease/atpaseDK261_05335Not AvailableNegative1155811 - 115803381178.4

Displaying genes 1111 – 1120 of 6415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.