Nitrosopumilaceae archaeon

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Description

The Nitrosopumilaceae family of archaea is notable for its unique role in the nitrogen cycle, particularly in ammonia oxidation. This family contains a single replicon, which contributes to its genomic simplicity and efficiency in metabolic processes. The specific accession number for one member of this family is UYNY00000000.3, which provides a reference point for genetic studies and comparative analyses within microbial ecology. Members of the Nitrosopumilaceae are often found in marine and terrestrial environments, where they play a crucial role in nitrification. By oxidizing ammonia to nitrite, these archaea contribute significantly to nitrogen availability in ecosystems, influencing both microbial community dynamics and nutrient cycling. Their presence can enhance the productivity of various habitats by facilitating the use of nitrogen compounds by plants and other microorganisms. In summary, the Nitrosopumilaceae archaea, with their single replicon and specific accession number UYNY00000000.3, are essential players in the nitrogen cycle. Their metabolic capabilities not only impact their immediate environment but also have broader ecological implications, supporting nutrient cycling and ecosystem health in diverse habitats.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrosopumilaceae archaeon isolate IBTHAUMO2 genome assembly,

Gene Summary

Adenine Count

352593 bp

Thymine Count

349739 bp

Guanine Count

648413 bp

Cytosine Count

645768 bp

Genome Length

1996680 bp

Protein-coding Genes

2244 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal 5'-phosphate synthase subunit pdxtIBTHAUMO2_590006Not AvailablePositive1286278 - 128687120282.6
valine--trna ligaseIBTHAUMO2_590007Not AvailableNegative1286857 - 128913985807.8
conserved hypothetical proteinIBTHAUMO2_590008Not AvailableNegative1289136 - 128990628285.6
exported hypothetical proteinIBTHAUMO2_590009Not AvailablePositive1290037 - 129226880202.0
nudix hydrolaseIBTHAUMO2_590010Not AvailablePositive1292270 - 129265014106.9
hypothetical proteinIBTHAUMO2_590011Not AvailableNegative1293129 - 129341310880.2
putative pterin-4-alpha-carbinolamine dehydratase (modular protein)IBTHAUMO2_590012Not AvailableNegative1293504 - 129454136236.8
putative asparagine synthase (asnb, asns)IBTHAUMO2_590013Not AvailablePositive1293841 - 129467729133.9
adenylosuccinate lyaseIBTHAUMO2_590014Not AvailableNegative1294598 - 129594747808.9
hypothetical proteinIBTHAUMO2_590015Not AvailableNegative1296021 - 12962187452.74

Displaying genes 1501 – 1510 of 2290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.